C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000602726 PPFIA3-012 ENSG00000177380 9606 + 19:49128580-49130599 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastENST00000602726
Transcript ID Bladder Breast
ENST00000602726 0.305±0.00 0.710±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003961 Ppfia3-201 protein_coding Mus_musculus 0 645
ENSMUST00000131154 Ppfia3-002 retained_intron Mus_musculus 0 645
ENSMUST00000107779 Ppfia3-001 protein_coding Mus_musculus 0 645
ENSMUST00000137578 Ppfia3-003 protein_coding Mus_musculus 0 527
ENSDART00000010885 PPFIA1-201 protein_coding Danio_rerio 8e-38 161
ENSMUST00000189361 Ppfia4-003 protein_coding Mus_musculus 8e-33 145
ENSMUST00000168515 Ppfia4-001 protein_coding Mus_musculus 8e-33 145

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