C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2E 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000602888 UBE2E3-011 ENSG00000170035 9606 + 2:180984006-181062920 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartLiverLungOvaryPlacentaTestisENST00000602888
Transcript ID Bladder Brain Breast Heart Liver Lung Ovary Placenta Testis
ENST00000602888 8.194±0.00 16.343±0.00 5.501±0.00 2.162±0.00 2.805±0.00 2.806±0.00 18.672±12.68 24.604±0.00 59.601±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004C2 CIL_0004C2_0002 CGP 2:179944876-181076585
CIL_0004BZ CIL_0004BZ_0002 CGP 2:180967248-181536187

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121433 Ube2e3-007 protein_coding Mus_musculus 0 761
ENSMUST00000028398 Ube2e3-001 protein_coding Mus_musculus 0 761
ENSMUST00000153266 Ube2e3-005 retained_intron Mus_musculus 0 398
ENSDART00000138549 ube2e3-003 retained_intron Danio_rerio 0 388
ENSDART00000020550 ube2e3-001 protein_coding Danio_rerio 0 387
ENSMUST00000153614 Ube2e3-002 retained_intron Mus_musculus 0 313
ENSMUST00000130914 Ube2e3-004 protein_coding Mus_musculus 0 196

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