C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000604757 GS1-21A4.2-001 ENSG00000270385 9606 + 16:87892955-87893735 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000604757
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000604757 0.089±0.00 0.240±0.00 0.052±0.00 0.047±0.00 0.045±0.00 0.101±0.00 0.618±0.00 0.048±0.00 0.084±0.00 0.064±0.00 0.044±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002SX CIL_0002SX_0001 CGP 16:87830023-87936529
CIL_0002SY CIL_0002SY_0001 CGP 16:87881546-88118422

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178774 Rps10-201 protein_coding Mus_musculus 0 446
ENSMUST00000114881 Rps10-003 protein_coding Mus_musculus 0 446
ENSMUST00000114882 Rps10-001 protein_coding Mus_musculus 0 446
ENSMUST00000127484 Rps10-ps2-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000155071 Rps10-006 processed_transcript Mus_musculus 0 407
ENSMUST00000145226 Rps10-004 retained_intron Mus_musculus 0 361
ENSMUST00000025052 Rps10-002 protein_coding Mus_musculus 0 361
ENSMUST00000120308 Rps10-ps4-001 processed_pseudogene Mus_musculus 0 296
ENSMUST00000152982 Rps10-007 processed_transcript Mus_musculus 0 219

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