C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome c, somatic pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000604815 CYCSP1-001 ENSG00000271423 9606 + 14:76633714-76634028 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastENST00000604815
Transcript ID Brain Breast
ENST00000604815 0.122±0.00 0.059±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007M1 CIL_0007M1_0001 UCNEbase 14:76034985-76675411
CIL_0003P4 CIL_0003P4_0001 CGP 14:76310614-76783015
CIL_0007VF CIL_0007VF_0001 VISTA 14:76618298-77221354
CIL_0008WP CIL_0008WP_0001 VISTA 14:76629854-77233554

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073080 Gm10053-201 protein_coding Mus_musculus 0 407
ENSMUST00000077766 Cycs-002 retained_intron Mus_musculus 0 407
ENSMUST00000161401 Cycs-001 protein_coding Mus_musculus 0 407
ENSMUST00000078246 Gm10108-201 protein_coding Mus_musculus 0 407
ENSMUST00000118431 Gm13772-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000119535 Gm11625-001 processed_pseudogene Mus_musculus 0 348
ENSMUST00000119355 Gm13252-001 processed_pseudogene Mus_musculus 0 344
ENSMUST00000120216 Gm15781-001 processed_pseudogene Mus_musculus 0 274
ENSMUST00000119817 Gm11857-001 processed_pseudogene Mus_musculus 0 263

Loading