C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: chemokine (C-C motif) receptor 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000609590 CCR6-001 ENSG00000272980 9606 + 6:166999405-167139141 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLiverLungOvaryENST00000609590
Transcript ID Brain Colon Liver Lung Ovary
ENST00000609590 0.257±0.00 0.848±0.00 0.281±0.00 0.535±0.00 1.493±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004W6 CIL_0004W6_0001 CGP 6:166929504-167052713
CIL_0002HA CIL_0002HA_0002 CGP 6:166999182-167139141

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024636 Fgfr1op-002 protein_coding Mus_musculus 0 721
ENSMUST00000097419 Fgfr1op-001 protein_coding Mus_musculus 0 484
ENSMUST00000161898 Fgfr1op-004 protein_coding Mus_musculus 0 379
ENSMUST00000162586 Fgfr1op-003 retained_intron Mus_musculus 0 298
ENSMUST00000063683 Tagap1-201 protein_coding Mus_musculus 0 237

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