C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosome binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000610403 RRBP1-203 ENSG00000125844 9606 - 20:17613678-17659973 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000610403
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000610403 14.671±0.00 11.321±0.00 1.181±0.00 10.194±0.00 20.778±0.00 16.941±0.00 1.780±0.00 32.069±0.00 35.400±0.00 23.253±0.00 3.573±0.00 30.869±0.00 26.336±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YD CIL_0008YD_0001 VISTA 20:17559199-18160694
CIL_0002D9 CIL_0002D9_0001 CGP 20:17569863-17682295
CIL_0002DA CIL_0002DA_0001 CGP 20:17613678-17735871

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IDA endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000016072 Rrbp1-002 protein_coding Mus_musculus 0 2669
ENSMUST00000136068 Rrbp1-005 processed_transcript Mus_musculus 0 935
ENSMUST00000154649 Rrbp1-003 processed_transcript Mus_musculus 0 719
ENSMUST00000140511 Rrbp1-007 processed_transcript Mus_musculus 0 542
ENSMUST00000135367 Rrbp1-008 processed_transcript Mus_musculus 0 300
ENSMUST00000155539 Rrbp1-006 processed_transcript Mus_musculus 0 207

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