C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ribosome binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135367 Rrbp1-008 ENSMUSG00000027422 10090 - 2:143948128-143949736 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENSMUST00000135367
Transcript ID Ovary Placenta Testis
ENSMUST00000135367 211.735±0.00 315.225±8.94 96.625±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YD CIL_0008YD_0002 VISTA 2:143876906-144478692
CIL_0002D9 CIL_0002D9_0002 CGP 2:143915320-144011263
CIL_0002DA CIL_0002DA_0002 CGP 2:143947395-144073979

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246043 RRBP1-201 protein_coding Homo_sapiens 0 300
ENST00000360807 RRBP1-001 protein_coding Homo_sapiens 0 300
ENST00000377807 RRBP1-202 protein_coding Homo_sapiens 0 300
ENST00000377813 RRBP1-002 protein_coding Homo_sapiens 0 300
ENST00000418013 RP11-598O8.1-001 processed_pseudogene Homo_sapiens 3.99931e-42 176
ENST00000455029 RRBP1-007 protein_coding Homo_sapiens 0 300
ENST00000468428 RRBP1-004 retained_intron Homo_sapiens 0 300
ENST00000470422 RRBP1-005 protein_coding Homo_sapiens 0 298
ENST00000610403 RRBP1-203 protein_coding Homo_sapiens 0 300

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