C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: reticulon 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000611068 RTN1-201 ENSG00000139970 9606 - 14:59596328-59870752 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000611068
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000611068 8.855±0.00 3.018±0.00 55.367±0.00 4.047±0.00 1.545±0.00 0.234±0.00 0.746±0.06 1.634±0.95 0.912±0.82 1.567±0.44 0.935±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000S5 CIL_0000S5_0001 CGP 14:59504539-59870966
CIL_0005ZY CIL_0005ZY_0002 CGP 14:59595976-60063559

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078505 Rtn1-001 protein_coding Mus_musculus 0 2163
ENSMUST00000150156 Rtn1-002 processed_transcript Mus_musculus 0 878
ENSMUST00000021497 Rtn1-201 protein_coding Mus_musculus 0 876
ENSMUST00000137990 Rtn1-003 protein_coding Mus_musculus 0 865
ENSMUST00000144181 Rtn1-004 processed_transcript Mus_musculus 0 278

Loading