C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vacuolar protein sorting 13 homolog D (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000613099 VPS13D-003 ENSG00000048707 9606 + 1:12230067-12512047 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000613099
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000613099 1.669±0.00 1.151±0.00 1.290±0.00 2.590±0.05 0.943±0.00 1.253±0.33 2.786±0.00 0.999±0.00 2.083±1.72 0.771±0.00 2.533±0.01 1.053±0.32 0.564±0.16 0.927±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020441 Vps13d-001 protein_coding Mus_musculus 0 15080
ENSMUST00000036579 Vps13d-002 protein_coding Mus_musculus 0 9308
ENSMUST00000185113 Vps13d-010 protein_coding Mus_musculus 0 5827
ENSMUST00000130704 Vps13d-003 nonsense_mediated_decay Mus_musculus 0 3773
ENSMUST00000141208 Vps13d-007 retained_intron Mus_musculus 0 968
ENSMUST00000144835 Vps13d-005 processed_transcript Mus_musculus 0 739
ENSMUST00000147511 Vps13d-006 processed_transcript Mus_musculus 0 652
ENSMUST00000132700 Vps13d-004 retained_intron Mus_musculus 0 584

Loading