C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vacuolar protein sorting 13 D (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000185113 Vps13d-010 ENSMUSG00000020220 10090 - 4:144974596-145155486 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000185113
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000185113 4.395±0.26 5.572±1.50 2.454±0.00 1.891±0.26 4.253±1.03 5.730±1.22 2.614±0.24 2.617±0.88 1.594±0.65 3.453±0.52 1.735±0.36 4.947±1.40 1.166±0.64 1.131±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003MQ CIL_0003MQ_0002 CGP 4:144892827-145195005

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000011700 VPS13D-014 protein_coding Homo_sapiens 0 11420
ENST00000460333 VPS13D-002 retained_intron Homo_sapiens 0 2782
ENST00000469054 VPS13D-009 processed_transcript Homo_sapiens 0 540
ENST00000476045 VPS13D-013 processed_transcript Homo_sapiens 0 366
ENST00000481484 VPS13D-011 processed_transcript Homo_sapiens 0 363
ENST00000487188 VPS13D-004 processed_transcript Homo_sapiens 0 2172
ENST00000543710 VPS13D-005 processed_transcript Homo_sapiens 0 2278
ENST00000543766 VPS13D-006 protein_coding Homo_sapiens 0 865
ENST00000613099 VPS13D-003 protein_coding Homo_sapiens 0 5827
ENST00000620676 VPS13D-001 protein_coding Homo_sapiens 0 11410

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