C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein tyrosine phosphatase, receptor type, T
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000617474 PTPRT-010 ENSG00000196090 9606 - 20:42080879-43189917 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartPlacentaENST00000617474
Transcript ID Bladder Heart Placenta
ENST00000617474 0.077±0.00 0.040±0.00 0.398±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004E5 CIL_0004E5_0001 CGP 20:41402101-43189970
CIL_0004E4 CIL_0004E4_0001 CGP 20:42072752-43464247

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109443 Ptprt-003 protein_coding Mus_musculus 0 5795
ENSMUST00000109441 Ptprt-004 protein_coding Mus_musculus 0 3000
ENSMUST00000109445 Ptprt-001 protein_coding Mus_musculus 0 3000
ENSMUST00000109442 Ptprt-002 protein_coding Mus_musculus 0 2793
ENSMUST00000153770 Ptprt-006 processed_transcript Mus_musculus 0 577
ENSMUST00000037974 Ptprm-201 protein_coding Mus_musculus 9.94922e-44 183

Loading