C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein tyrosine phosphatase, receptor type, T
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000618610 PTPRT-202 ENSG00000196090 9606 - 20:42080879-42472562 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposePlacentaENST00000618610
Transcript ID Adipose Placenta
ENST00000618610 0.038±0.00 0.264±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004E5 CIL_0004E5_0001 CGP 20:41402101-43189970
CIL_0004E4 CIL_0004E4_0001 CGP 20:42072752-43464247

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IEA protein binding
GO:0006470 IEA protein dephosphorylation
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109443 Ptprt-003 protein_coding Mus_musculus 0 3049
ENSMUST00000109442 Ptprt-002 protein_coding Mus_musculus 0 2789
ENSMUST00000109445 Ptprt-001 protein_coding Mus_musculus 0 2789
ENSMUST00000109441 Ptprt-004 protein_coding Mus_musculus 0 1941
ENSMUST00000153770 Ptprt-006 processed_transcript Mus_musculus 0 424
ENSMUST00000037974 Ptprm-201 protein_coding Mus_musculus 8.99634e-43 180

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