C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: retinoid X receptor, gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000619224 RXRG-201 ENSG00000143171 9606 - 1:165400923-165445355 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLungMuscleOvaryENST00000619224
Transcript ID Brain Breast Lung Muscle Ovary
ENST00000619224 0.859±0.00 0.275±0.00 0.209±0.00 2.234±0.00 0.119±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111380 Rxrg-004 protein_coding Mus_musculus 0 1718
ENSMUST00000111384 Rxrg-003 protein_coding Mus_musculus 0 1718
ENSMUST00000015987 Rxrg-001 protein_coding Mus_musculus 0 1718
ENSMUST00000111386 Rxrg-002 protein_coding Mus_musculus 0 1555
ENSMUST00000116612 Rxrb-003 protein_coding Mus_musculus 0 366
ENSMUST00000174299 Rxrb-010 protein_coding Mus_musculus 0 366
ENSMUST00000173354 Rxrb-002 protein_coding Mus_musculus 0 322
ENSMUST00000044858 Rxrb-001 protein_coding Mus_musculus 0 322
ENSMUST00000174578 Rxrb-009 retained_intron Mus_musculus 0 246

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