C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: keratin 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125888 Krt19-003 ENSMUSG00000020911 10090 - 11:100142120-100148665 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSMUST00000125888
Transcript ID Brain
ENSMUST00000125888 0.249±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_0017 CGP 11:100131758-100148665
CIL_0000TN CIL_0000TN_0006 CGP 11:100140810-100193246

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246635 KRT13-001 protein_coding Homo_sapiens 0 198
ENST00000251646 KRT33B-001 protein_coding Homo_sapiens 4e-19 100
ENST00000336861 KRT13-002 protein_coding Homo_sapiens 0 198
ENST00000361566 KRT19-001 protein_coding Homo_sapiens 0 381
ENST00000405746 KRT19P1-001 processed_pseudogene Homo_sapiens 0 318
ENST00000455635 KRT19-002 protein_coding Homo_sapiens 0 239
ENST00000464634 KRT13-006 nonsense_mediated_decay Homo_sapiens 0 198
ENST00000468313 KRT13-003 retained_intron Homo_sapiens 0 198
ENST00000468880 KRT19-005 retained_intron Homo_sapiens 3e-22 110
ENST00000479031 KRT19-004 retained_intron Homo_sapiens 7e-26 121
ENST00000570596 KRT33B-001 protein_coding Homo_sapiens 4e-19 100
ENST00000587544 KRT13-005 protein_coding Homo_sapiens 0 198
ENST00000590425 KRT13-007 protein_coding Homo_sapiens 0 198
ENST00000593096 KRT19-007 protein_coding Homo_sapiens 0 237
ENST00000620421 KRT33B-201 protein_coding Homo_sapiens 3e-19 100

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