C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: vacuolar protein sorting 13 homolog D (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000620676 VPS13D-001 ENSG00000048707 9606 + 1:12230067-12512047 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyENST00000620676
Transcript ID Breast Kidney
ENST00000620676 2.817±0.00 0.809±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036579 Vps13d-002 protein_coding Mus_musculus 0 15270
ENSMUST00000185113 Vps13d-010 protein_coding Mus_musculus 0 11410
ENSMUST00000020441 Vps13d-001 protein_coding Mus_musculus 0 9252
ENSMUST00000130704 Vps13d-003 nonsense_mediated_decay Mus_musculus 0 3773
ENSMUST00000141208 Vps13d-007 retained_intron Mus_musculus 0 968
ENSMUST00000144835 Vps13d-005 processed_transcript Mus_musculus 0 739
ENSMUST00000147511 Vps13d-006 processed_transcript Mus_musculus 0 652
ENSMUST00000132700 Vps13d-004 retained_intron Mus_musculus 0 584

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