C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 114
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000623528 RNF114-006 ENSG00000124226 9606 + 20:49936336-49952152 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartLiverLungMuscleOvaryPlacentaTestisENST00000623528
Transcript ID Adipose Brain Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000623528 10.535±0.00 9.380±5.37 2.013±0.00 12.108±0.00 41.667±0.00 22.944±0.00 15.966±0.00 10.674±2.95 78.797±4.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I4 CIL_0008I4_0001 VISTA 20:49375075-49977641
CIL_00087E CIL_00087E_0001 VISTA 20:49719805-50323644
CIL_00027D CIL_00027D_0001 CGP 20:49903391-49953892
CIL_0006FM CIL_0006FM_0001 CGP 20:49936336-49988886

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000127939 Rnf114-003 nonsense_mediated_decay Mus_musculus 0 575
ENSMUST00000078050 Rnf114-001 protein_coding Mus_musculus 0 473
ENSMUST00000109214 Rnf114-002 protein_coding Mus_musculus 0 473

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