C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 114
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000624666 RNF114-005 ENSG00000124226 9606 + 20:49943931-49952300 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverLungOvaryENST00000624666
Transcript ID Adrenal Breast Colon Liver Lung Ovary
ENST00000624666 3.857±0.00 4.309±0.00 1.550±0.00 1.755±0.00 3.162±1.50 1.979±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I4 CIL_0008I4_0001 VISTA 20:49375075-49977641
CIL_00087E CIL_00087E_0001 VISTA 20:49719805-50323644
CIL_00027D CIL_00027D_0001 CGP 20:49903391-49953892
CIL_0006FM CIL_0006FM_0001 CGP 20:49936336-49988886

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000127939 Rnf114-003 nonsense_mediated_decay Mus_musculus 0 475
ENSMUST00000078050 Rnf114-001 protein_coding Mus_musculus 0 475
ENSMUST00000109214 Rnf114-002 protein_coding Mus_musculus 0 475
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00001 57

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