C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cortactin binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000077063 CTTNBP2 9606 - 7:117710651-117874139 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000160373 CTTNBP2-001 117710651-117873507 protein_coding
  ENST00000412853 CTTNBP2-007 117810767-117874139 protein_coding
  ENST00000416239 CTTNBP2-004 117755380-117760593 protein_coding
  ENST00000434890 CTTNBP2-002 117792586-117871638 protein_coding
  ENST00000435233 CTTNBP2-009 117735331-117760647 protein_coding
  ENST00000441556 CTTNBP2-012 117710863-117873429 nonsense_mediated_decay
  ENST00000445366 CTTNBP2-010 117711628-117728208 nonsense_mediated_decay
  ENST00000446636 CTTNBP2-011 117710741-117791780 protein_coding
  ENST00000454375 CTTNBP2-006 117792662-117872220 protein_coding
  ENST00000467088 CTTNBP2-008 117760268-117767191 retained_intron
  ENST00000482124 CTTNBP2-005 117755372-117758112 retained_intron
  ENST00000487820 CTTNBP2-003 117792596-117793605 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMusclePlacentaTestisENST00000160373ENST00000441556ENST00000446636
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Placenta Testis
ENST00000160373 N/A 0.563±0.00 N/A 1.082±0.45 N/A 0.162±0.00 0.497±0.00 0.142±0.00 0.510±0.10 N/A 0.174±0.04 0.169±0.00
ENST00000441556 0.342±0.00 N/A N/A 1.439±0.98 0.328±0.00 0.233±0.00 0.604±0.00 1.225±0.00 N/A N/A 0.203±0.02 0.524±0.00
ENST00000446636 N/A N/A 0.495±0.00 N/A 0.211±0.00 N/A 1.400±0.00 N/A N/A 0.098±0.00 0.070±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00063R CIL_00063R_0002 CGP 7:117363222-117715971
CIL_0005U6 CIL_0005U6_0002 CGP 7:117465784-117874139
CIL_0003QX CIL_0003QX_0001 CGP 7:117710651-118192824

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0007420 IEA brain development
GO:0008021 IEA synaptic vesicle
GO:0017124 IEA SH3 domain binding
GO:0042995 IEA cell projection

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040991 cttnbp2 cortactin binding protein 2 protein_coding Danio_rerio
ENSMUSG00000000416 Cttnbp2 cortactin binding protein 2 protein_coding Mus_musculus

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