C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cortactin binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000446636 CTTNBP2-011 ENSG00000077063 9606 - 7:117710741-117791780 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastKidneyMusclePlacentaENST00000446636
Transcript ID Bladder Breast Kidney Muscle Placenta
ENST00000446636 0.495±0.00 0.211±0.00 1.400±0.00 0.098±0.00 0.070±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00063R CIL_00063R_0002 CGP 7:117363222-117715971
CIL_0005U6 CIL_0005U6_0002 CGP 7:117465784-117874139
CIL_0003QX CIL_0003QX_0001 CGP 7:117710651-118192824

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000146775 Cttnbp2-004 protein_coding Mus_musculus 0 4224
ENSMUST00000090601 Cttnbp2-003 protein_coding Mus_musculus 0 3663
ENSMUST00000152499 Cttnbp2-005 retained_intron Mus_musculus 0 3663
ENSMUST00000148602 Cttnbp2-001 nonsense_mediated_decay Mus_musculus 0 3591
ENSMUST00000149570 Cttnbp2-010 nonsense_mediated_decay Mus_musculus 0 494
ENSMUST00000139557 Cttnbp2-002 retained_intron Mus_musculus 0 486
ENSMUST00000141581 Cttnbp2-009 protein_coding Mus_musculus 0 388

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