C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cortactin binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000160373 CTTNBP2-001 ENSG00000077063 9606 - 7:117710651-117873507 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartKidneyLiverLungPlacentaTestisENST00000160373
Transcript ID Adrenal Brain Heart Kidney Liver Lung Placenta Testis
ENST00000160373 0.563±0.00 1.082±0.45 0.162±0.00 0.497±0.00 0.142±0.00 0.510±0.10 0.174±0.04 0.169±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00063R CIL_00063R_0002 CGP 7:117363222-117715971
CIL_0005U6 CIL_0005U6_0002 CGP 7:117465784-117874139
CIL_0003QX CIL_0003QX_0001 CGP 7:117710651-118192824

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0007420 IEA brain development
GO:0008021 IEA synaptic vesicle
GO:0017124 IEA SH3 domain binding
GO:0042995 IEA cell projection

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090601 Cttnbp2-003 protein_coding Mus_musculus 0 5877
ENSMUST00000152499 Cttnbp2-005 retained_intron Mus_musculus 0 3668
ENSMUST00000146775 Cttnbp2-004 protein_coding Mus_musculus 0 3663
ENSMUST00000148602 Cttnbp2-001 nonsense_mediated_decay Mus_musculus 0 3598
ENSMUST00000139557 Cttnbp2-002 retained_intron Mus_musculus 0 2183
ENSMUST00000129669 Cttnbp2-008 protein_coding Mus_musculus 0 643
ENSMUST00000149570 Cttnbp2-010 nonsense_mediated_decay Mus_musculus 0 494
ENSMUST00000142963 Cttnbp2-007 protein_coding Mus_musculus 0 416
ENSMUST00000141581 Cttnbp2-009 protein_coding Mus_musculus 0 388
ENSMUST00000140416 Cttnbp2-006 retained_intron Mus_musculus 0 331

Loading