C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myelin expression factor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000104177 MYEF2 9606 - 15:48134631-48178517 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000267836 MYEF2-003 48141797-48178353 protein_coding
  ENST00000324324 MYEF2-001 48134631-48178517 protein_coding
  ENST00000557868 MYEF2-014 48157136-48158920 processed_transcript
  ENST00000558289 MYEF2-005 48139432-48149986 retained_intron
  ENST00000558395 MYEF2-009 48143061-48159670 protein_coding
  ENST00000559057 MYEF2-013 48142666-48149313 retained_intron
  ENST00000559862 MYEF2-007 48159596-48178291 processed_transcript
  ENST00000560157 MYEF2-008 48162695-48169910 processed_transcript
  ENST00000560172 MYEF2-012 48141798-48149326 protein_coding
  ENST00000560513 MYEF2-011 48149197-48154076 retained_intron
  ENST00000560530 MYEF2-004 48141796-48152274 retained_intron
  ENST00000561151 MYEF2-006 48162719-48178326 nonsense_mediated_decay
  ENST00000561301 MYEF2-010 48152117-48158921 retained_intron
  ENST00000561351 MYEF2-002 48152307-48178316 nonsense_mediated_decay
  ENST00000610570 MYEF2-201 48152308-48178316 protein_coding
  ENST00000616409 MYEF2-202 48142652-48178144 protein_coding
  ENST00000620867 MYEF2-203 48141806-48152280 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000267836ENST00000324324ENST00000558289ENST00000558395ENST00000559862ENST00000560157ENST00000560172ENST00000560530ENST00000616409ENST00000620867
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000267836 1.259±0.00 0.908±0.00 N/A 3.134±0.90 0.581±0.05 1.256±0.00 0.997±0.00 2.242±0.00 N/A N/A N/A 0.374±0.20 0.291±0.07 7.153±3.36
ENST00000324324 N/A N/A N/A 1.088±0.00 N/A 0.244±0.03 0.157±0.02 0.709±0.00 0.273±0.00 N/A 0.017±0.00 0.073±0.02 N/A N/A
ENST00000558289 0.519±0.00 0.390±0.00 N/A N/A 0.295±0.00 0.931±0.06 0.415±0.00 0.937±0.88 0.358±0.34 0.784±0.00 N/A 0.308±0.02 0.108±0.00 1.328±0.00
ENST00000558395 N/A N/A N/A 17.714±0.00 1.750±0.00 3.338±0.00 N/A 0.444±0.00 0.042±0.00 N/A 0.247±0.00 1.447±1.37 N/A 27.720±0.00
ENST00000559862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.433±1.05 N/A
ENST00000560157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.366±0.00 N/A
ENST00000560172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.357±0.00 N/A
ENST00000560530 N/A N/A 3.090±0.00 N/A N/A N/A N/A 2.297±0.00 1.403±0.00 1.142±0.14 N/A 0.498±0.23 N/A N/A
ENST00000616409 1.447±0.00 1.000±0.00 N/A 6.786±0.00 N/A N/A 0.891±0.00 2.910±0.00 N/A N/A N/A 0.633±0.40 0.106±0.00 14.532±8.73
ENST00000620867 N/A N/A N/A N/A 0.978±0.00 N/A N/A N/A 0.016±0.00 N/A 0.199±0.00 N/A 0.138±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004NB CIL_0004NB_0001 CGP 15:47184101-48142672
CIL_0004QO CIL_0004QO_0002 CGP 15:48120972-48178517
CIL_0004NI CIL_0004NI_0001 CGP 15:48134631-48203756

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0014902 IEP myotube differentiation
GO:0030182 IEP neuron differentiation
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059398 myef2 myelin expression factor 2 protein_coding Danio_rerio
ENSMUSG00000027201 Myef2 myelin basic protein expression factor 2, repressor protein_coding Mus_musculus
ENSMUSG00000049230 Gm9833 predicted gene 9833 protein_coding Mus_musculus

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