C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000310837 EIF1-003 ENSG00000173812 9606 + 17:41688901-41691630 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000310837
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000310837 160.996±0.00 152.162±0.00 9.003±0.00 101.113±87.59 99.720±85.04 134.219±120.51 77.999±68.23 169.059±0.00 31.102±18.19 164.428±150.13 248.460±177.67 219.940±135.83 38.478±0.00 160.184±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TT CIL_0000TT_0002 CGP 17:41619437-41692668
CIL_0007BG CIL_0007BG_0001 CGP 17:41688885-41715969

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049385 Eif1-001 protein_coding Mus_musculus 0 643
ENSMUST00000132618 Eif1-005 processed_transcript Mus_musculus 0 536
ENSMUST00000088313 Emd-002 protein_coding Mus_musculus 0 512
ENSMUST00000152521 Eif1-004 protein_coding Mus_musculus 0 484
ENSMUST00000086606 Eif1-ps1-201 processed_pseudogene Mus_musculus 0 230
ENSMUST00000173735 Gm6155-001 processed_pseudogene Mus_musculus 0 224
ENSMUST00000119926 Gm14686-001 transcribed_processed_pseudogene Mus_musculus 0 219
ENSMUST00000139408 Gm10157-001 processed_pseudogene Mus_musculus 0 219
ENSMUST00000178971 Gm6900-001 processed_pseudogene Mus_musculus 0 219
ENSMUST00000139846 Eif1-003 processed_transcript Mus_musculus 0 219
ENSMUST00000179168 Gm16378-001 processed_pseudogene Mus_musculus 0 213
ENSMUST00000076828 Gm5265-201 processed_pseudogene Mus_musculus 0 213
ENSMUST00000161062 Gm6428-001 processed_pseudogene Mus_musculus 0 213
ENSMUST00000072732 Gm5471-201 processed_pseudogene Mus_musculus 0 213
ENSMUST00000121450 Eif1-ps3-001 processed_pseudogene Mus_musculus 0 202
ENSMUST00000100019 Gm6913-001 processed_pseudogene Mus_musculus 0 202
ENSMUST00000084813 RP24-208N6.2-001 processed_pseudogene Mus_musculus 1.96182e-44 183
ENSMUST00000151513 Eif1-002 protein_coding Mus_musculus 0.0000000007 69
ENSDART00000009132 eif1b-201 protein_coding Danio_rerio 0.0000000007 69
ENSDART00000151383 eif1b-003 retained_intron Danio_rerio 0.0000000007 69
ENSDART00000151582 eif1b-002 retained_intron Danio_rerio 0.0000000007 69
ENSDART00000132874 eif1b-001 protein_coding Danio_rerio 0.0000000007 69

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