C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: CUB and Sushi multiple domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000523488 CSMD1-008 ENSG00000183117 9606 - 8:3151247-3396319 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungENST00000523488
Transcript ID Lung
ENST00000523488 0.107±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000070 CIL_000070_0002 CGP 8:2045040-4994972
CIL_0000LC CIL_0000LC_0001 CGP 8:2935353-6643623

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000082104 Csmd1-001 protein_coding Mus_musculus 0 3639
ENSMUST00000131778 Csmd1-003 processed_transcript Mus_musculus 0 2832
ENSMUST00000100670 Csmd3-201 protein_coding Mus_musculus 0 239
ENSMUST00000162830 Csmd3-001 protein_coding Mus_musculus 0 239
ENSMUST00000160658 Csmd3-004 protein_coding Mus_musculus 0 239
ENSMUST00000161653 Csmd3-005 protein_coding Mus_musculus 0 230
ENSMUST00000110261 Csmd3-006 retained_intron Mus_musculus 4.99997e-41 174
ENSDART00000006458 protein_coding Danio_rerio 3e-28 132
ENSDART00000148564 protein_coding Danio_rerio 3e-28 132

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