C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CUB and Sushi multiple domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000602723 CSMD1-018 ENSG00000183117 9606 - 8:2938099-4994701 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000602723
Transcript ID Muscle
ENST00000602723 0.010±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000070 CIL_000070_0002 CGP 8:2045040-4994972
CIL_0000LC CIL_0000LC_0001 CGP 8:2935353-6643623

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000082104 Csmd1-001 protein_coding Mus_musculus 0 7738
ENSMUST00000131778 Csmd1-003 processed_transcript Mus_musculus 0 5483
ENSMUST00000138348 Csmd1-007 retained_intron Mus_musculus 0 1583
ENSMUST00000137947 Csmd1-006 processed_transcript Mus_musculus 0 1459
ENSMUST00000125551 Csmd1-002 retained_intron Mus_musculus 0 900
ENSMUST00000160658 Csmd3-004 protein_coding Mus_musculus 0 518
ENSMUST00000133933 Csmd1-005 retained_intron Mus_musculus 0 475
ENSMUST00000100670 Csmd3-201 protein_coding Mus_musculus 0 457
ENSMUST00000162830 Csmd3-001 protein_coding Mus_musculus 0 457
ENSMUST00000161653 Csmd3-005 protein_coding Mus_musculus 0 296
ENSMUST00000122983 Csmd1-004 processed_transcript Mus_musculus 0 268
ENSDART00000006458 protein_coding Danio_rerio 0 209
ENSDART00000148564 protein_coding Danio_rerio 0 209
ENSMUST00000110261 Csmd3-006 retained_intron Mus_musculus 9.99995e-41 174

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