C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: 5-hydroxytryptamine (serotonin) receptor 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024798 Htr7 10090 - 19:35958734-36057507 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000099505 Htr7-006 35960315-36057373 protein_coding
  ENSMUST00000164639 Htr7-001 35958734-36057340 protein_coding
  ENSMUST00000164781 Htr7-004 35958734-36057360 nonsense_mediated_decay
  ENSMUST00000165215 Htr7-002 35958734-36057360 nonsense_mediated_decay
  ENSMUST00000166074 Htr7-005 35958745-36057368 protein_coding
  ENSMUST00000170360 Htr7-003 35959820-36057507 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099505ENSMUST00000164639ENSMUST00000164781ENSMUST00000165215ENSMUST00000166074ENSMUST00000170360
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099505 N/A 0.049±0.01 N/A N/A 0.297±0.09 0.143±0.10 0.039±0.01 N/A 0.025±0.01 0.071±0.02 N/A 0.134±0.06 0.004±0.00 0.041±0.02
ENSMUST00000164639 0.298±0.00 N/A 0.008±0.00 0.840±0.23 0.139±0.09 0.040±0.01 0.106±0.05 0.045±0.00 0.010±0.01 0.103±0.07 0.255±0.08 0.097±0.07 0.018±0.01 0.030±0.00
ENSMUST00000164781 N/A N/A N/A N/A 0.190±0.00 0.052±0.00 N/A 0.025±0.02 N/A N/A N/A 0.138±0.09 N/A N/A
ENSMUST00000165215 0.208±0.00 0.065±0.00 N/A 0.548±0.14 N/A 0.054±0.00 0.156±0.00 0.028±0.02 N/A N/A 0.387±0.00 0.027±0.00 N/A N/A
ENSMUST00000166074 0.165±0.00 N/A 0.086±0.00 0.626±0.10 0.052±0.00 N/A N/A N/A 0.001±0.00 N/A 0.148±0.00 0.003±0.00 0.002±0.00 N/A
ENSMUST00000170360 N/A 0.155±0.03 0.020±0.00 N/A 0.244±0.06 0.153±0.10 0.115±0.02 0.072±0.00 0.017±0.00 0.198±0.05 0.065±0.00 0.100±0.08 N/A 0.067±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PF CIL_0005PF_0003 CGP 19:34922358-36057507
CIL_0008BY CIL_0008BY_0002 VISTA 19:35829039-36429586
CIL_0005UK CIL_0005UK_0002 CGP 19:35958734-36104772

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004993 IEA serotonin receptor activity
GO:0005886 IEA plasma membrane
GO:0006939 IEA smooth muscle contraction
GO:0007210 IEA serotonin receptor signaling pathway
GO:0007268 IEA synaptic transmission
GO:0007623 IEA circadian rhythm
GO:0016021 IEA integral component of membrane
GO:0042310 IEA vasoconstriction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056949 HTR7 (1 of 2) 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled protein_coding Danio_rerio
ENSDARG00000089287 HTR7 (2 of 2) 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled protein_coding Danio_rerio
ENSG00000148680 HTR7 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled protein_coding Homo_sapiens

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