C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin T2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153359 Ccnt2-005 ENSMUSG00000026349 10090 + 1:127796571-127808061 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000153359
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000153359 3.063±0.73 2.351±0.48 3.640±0.18 6.350±0.00 3.343±0.37 2.633±0.59 1.421±0.09 1.748±0.41 2.659±1.37 4.125±1.02 1.956±0.36 2.999±0.99 1.732±0.16 0.805±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T0 CIL_0007T0_0002 VISTA 1:127230775-127832241
CIL_0001IZ CIL_0001IZ_0002 CGP 1:127729413-127808061
CIL_0006VR CIL_0006VR_0002 CGP 1:127774164-127840321

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000053282 ccnt2a-001 protein_coding Danio_rerio 0 217
ENSDART00000143599 ccnt2b-002 protein_coding Danio_rerio 3e-21 110
ENST00000264157 CCNT2-001 protein_coding Homo_sapiens 0 2507
ENST00000295238 CCNT2-002 protein_coding Homo_sapiens 0 1251
ENST00000417175 CCNT2-009 nonsense_mediated_decay Homo_sapiens 0 520
ENST00000419781 CCNT2-004 nonsense_mediated_decay Homo_sapiens 0 3219
ENST00000438691 CCNT2-005 protein_coding Homo_sapiens 5.04467e-44 182
ENST00000446247 CCNT2-007 protein_coding Homo_sapiens 0 448
ENST00000452521 CCNT2-010 protein_coding Homo_sapiens 0 398
ENST00000452839 CCNT2-006 nonsense_mediated_decay Homo_sapiens 0 1251

Loading