C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin T2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143513 Ccnt2-007 ENSMUSG00000026349 10090 + 1:127774164-127798401 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLiverTestisENSMUST00000143513
Transcript ID Adipose Adrenal Breast Colon Liver Testis
ENSMUST00000143513 9.992±0.00 7.137±0.56 8.415±0.80 7.784±0.00 3.498±0.00 3.232±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T0 CIL_0007T0_0002 VISTA 1:127230775-127832241
CIL_0001IZ CIL_0001IZ_0002 CGP 1:127729413-127808061
CIL_0006VR CIL_0006VR_0002 CGP 1:127774164-127840321

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000143599 ccnt2b-002 protein_coding Danio_rerio 0 348
ENST00000264157 CCNT2-001 protein_coding Homo_sapiens 0 885
ENST00000295238 CCNT2-002 protein_coding Homo_sapiens 0 885
ENST00000417175 CCNT2-009 nonsense_mediated_decay Homo_sapiens 0 776
ENST00000419781 CCNT2-004 nonsense_mediated_decay Homo_sapiens 0 808
ENST00000446247 CCNT2-007 protein_coding Homo_sapiens 3e-16 90
ENST00000452839 CCNT2-006 nonsense_mediated_decay Homo_sapiens 0 800
ENST00000464932 CCNT2-003 retained_intron Homo_sapiens 0 407
ENST00000475094 CCNT2-008 retained_intron Homo_sapiens 0 795

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