C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: G elongation factor, mitochondrial 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027774 Gfm1 10090 + 3:67430096-67476529 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000077271 Gfm1-001 67430096-67476529 protein_coding
  ENSMUST00000160529 Gfm1-003 67456479-67474804 retained_intron
  ENSMUST00000161009 Gfm1-002 67430116-67458805 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000077271ENSMUST00000160529ENSMUST00000161009
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000077271 3.492±0.31 N/A 3.149±0.41 4.807±1.32 3.258±0.94 N/A 11.995±0.46 6.120±0.78 4.201±1.03 3.183±0.22 14.582±1.16 3.549±1.42 5.220±1.81 1.373±0.23
ENSMUST00000160529 N/A N/A N/A N/A 11.557±2.73 N/A 22.214±1.38 11.942±0.66 13.103±2.61 N/A 14.234±0.80 9.925±0.60 9.656±4.75 N/A
ENSMUST00000161009 8.703±0.41 29.806±8.80 N/A 4.502±0.57 9.551±2.58 11.461±1.46 20.791±1.77 15.675±1.48 14.463±3.49 7.884±1.40 13.519±1.07 11.244±1.56 9.888±6.92 4.416±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BN CIL_0008BN_0002 VISTA 3:66846973-67447795
CIL_00086V CIL_00086V_0002 VISTA 3:66870618-67471970
CIL_0008BM CIL_0008BM_0002 VISTA 3:66890932-67492590
CIL_0008KO CIL_0008KO_0002 VISTA 3:66912683-67513884
CIL_000808 CIL_000808_0002 VISTA 3:67009670-67610443
CIL_000815 CIL_000815_0002 VISTA 3:67040647-67641402
CIL_000937 CIL_000937_0002 VISTA 3:67250193-67852228
CIL_0004JV CIL_0004JV_0003 CGP 3:67374097-67476529
CIL_0004JU CIL_0004JU_0003 CGP 3:67430096-67476529

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003746 ISS translation elongation factor activity
GO:0003924 ISS GTPase activity
GO:0005515 IEA protein binding
GO:0005525 IEA GTP binding
GO:0005739 IDA mitochondrion
GO:0006184 IEA GTP catabolic process
GO:0044822 IEA poly(A) RNA binding
GO:0070125 ISS mitochondrial translational elongation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063624 gfm1 G elongation factor, mitochondrial 1 protein_coding Danio_rerio
ENSG00000168827 GFM1 G elongation factor, mitochondrial 1 protein_coding Homo_sapiens

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