C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Iroquois related homeobox 6 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031738 Irx6 10090 + 8:92674288-92680956 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034185 Irx6-001 92674288-92680956 protein_coding
  ENSMUST00000167261 Irx6-002 92674826-92680956 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverLungPlacentaTestisENSMUST00000034185ENSMUST00000167261
Transcript ID Brain Breast Colon Heart Liver Lung Placenta Testis
ENSMUST00000034185 0.575±0.36 0.031±0.02 0.041±0.01 N/A N/A N/A 0.010±0.00 0.046±0.00
ENSMUST00000167261 0.194±0.04 N/A 0.058±0.03 0.013±0.00 0.014±0.01 0.017±0.01 0.002±0.00 0.067±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ON CIL_0007ON_0003 UCNEbase 8:88447800-92743752
CIL_000986 CIL_000986_0002 VISTA 8:92144893-92745556
CIL_000989 CIL_000989_0002 VISTA 8:92149353-92750411
CIL_00098A CIL_00098A_0002 VISTA 8:92245404-92846474
CIL_000987 CIL_000987_0002 VISTA 8:92255075-92855722
CIL_0007WY CIL_0007WY_0002 VISTA 8:92348089-92949598
CIL_0006KT CIL_0006KT_0002 CGP 8:92357796-92680956
CIL_000988 CIL_000988_0002 VISTA 8:92435258-93036114
CIL_00098D CIL_00098D_0002 VISTA 8:92442867-93044200
CIL_0001GQ CIL_0001GQ_0002 CGP 8:92674288-92853417

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034420 irx6a iroquois homeobox protein 6a protein_coding Danio_rerio
ENSG00000159387 IRX6 iroquois homeobox 6 protein_coding Homo_sapiens

Loading