C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00002D_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101473-ENSG00000132801 CGP 9606 20:45841721-45879122
GeneTranscriptPositionBiotype
ENSG00000101473 (ACOT8)
acyl-CoA thioesterase 8 		ENST00000217455 (ACOT8-001) 45841721-45857406 protein_coding
ENST00000426915 (ACOT8-003) 45853422-45857309 protein_coding
ENST00000457981 (ACOT8-004) 45853420-45857196 protein_coding
ENST00000461272 (ACOT8-002) 45841726-45857389 nonsense_mediated_decay
ENST00000481938 (ACOT8-007) 45848533-45857405 nonsense_mediated_decay
ENST00000483141 (ACOT8-011) 45842747-45857369 nonsense_mediated_decay
ENST00000484783 (ACOT8-009) 45843723-45857397 retained_intron
ENST00000484975 (ACOT8-012) 45842023-45849110 retained_intron
ENST00000486165 (ACOT8-005) 45844263-45857371 nonsense_mediated_decay
ENST00000487205 (ACOT8-008) 45841765-45855284 protein_coding
ENST00000488679 (ACOT8-006) 45841738-45857402 nonsense_mediated_decay
ENST00000493118 (ACOT8-010) 45842023-45857371 retained_intron
ENSG00000132801 (ZSWIM3)
zinc finger, SWIM-type containing 3 		ENST00000255152 (ZSWIM3-001) 45857617-45879122 protein_coding
ENSG00000277051 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000617007 (Metazoa_SRP.1-407) 45847630-45847940 misc_RNA
CIL_00002D_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000017307-ENSMUSG00000045822 CGP 10090 2:164792768-164822130
GeneTranscriptPositionBiotype
ENSMUSG00000045822 (Zswim3)
zinc finger SWIM-type containing 3 		ENSMUST00000052107 (Zswim3-001) 164805098-164822130 protein_coding
ENSMUSG00000050373 (Snx21)
sorting nexin family member 21 		ENSMUST00000056181 (Snx21-001) 164785991-164793810 protein_coding
ENSMUST00000140519 (Snx21-003) 164786794-164792624 protein_coding
ENSMUST00000152471 (Snx21-002) 164786017-164787632 protein_coding
ENSMUST00000172577 (Snx21-005) 164785991-164793052 protein_coding
ENSMUST00000173945 (Snx21-006) 164790411-164793816 retained_intron
ENSMUST00000174070 (Snx21-004) 164785823-164792487 protein_coding
ENSMUST00000174342 (Snx21-007) 164791652-164793808 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00002D_0001ENSG00000101473ENST00000217455ENST00000426915ENST00000457981ENST00000461272ENST00000481938ENST00000483141ENST00000484783ENST00000484975ENST00000486165ENST00000487205ENST00000488679ENST00000493118ENSG00000132801ENST00000255152ENSG00000277051ENST00000617007CIL_00002D_0002ENSMUSG00000045822ENSMUST00000052107ENSMUSG00000050373ENSMUST00000056181ENSMUST00000140519ENSMUST00000152471ENSMUST00000172577ENSMUST00000173945ENSMUST00000174070ENSMUST00000174342
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00002D_0001ENSG00000101473ENST00000217455ENST00000461272ENST00000484783ENST00000484975ENST00000486165ENST00000488679ENST00000493118ENSG00000132801ENST00000255152ENSG00000277051ENST00000617007CIL_00002D_0002ENSMUSG00000045822ENSMUST00000052107ENSMUSG00000050373ENSMUST00000056181ENSMUST00000172577ENSMUST00000173945ENSMUST00000174070ENSMUST00000174342
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101473 ENST00000217455 N/A 6.856±0.00 N/A 9.406±4.20 15.388±0.00 8.295±3.06 7.285±0.00 7.758±6.35 6.848±0.00 6.804±0.00 18.865±0.00 9.416±6.43 15.405±2.50 16.339±1.39
ENST00000426915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.128±0.00 N/A N/A
ENST00000481938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484783 N/A N/A 1.951±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484975 2.640±0.00 N/A N/A 1.395±0.00 N/A 2.023±0.00 1.184±0.75 2.527±0.00 0.663±0.00 2.255±0.00 N/A 4.804±2.53 N/A 1.626±0.00
ENST00000486165 N/A N/A N/A 7.262±0.00 N/A N/A 1.657±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000487205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488679 N/A N/A N/A N/A N/A N/A N/A N/A 9.150±0.00 8.806±0.00 4.882±0.00 N/A N/A N/A
ENST00000493118 N/A 1.722±0.00 N/A 1.623±0.00 3.157±1.48 N/A N/A N/A 0.727±0.00 N/A 0.404±0.00 N/A 2.137±0.00 N/A
ENSG00000132801 ENST00000255152 0.344±0.00 1.006±0.00 0.324±0.00 0.569±0.16 0.502±0.11 0.742±0.31 0.314±0.11 0.772±0.56 0.699±0.00 0.525±0.21 0.081±0.00 1.474±0.30 0.776±0.13 1.656±0.10
ENSG00000277051 ENST00000617007 0.428±0.00 1.384±0.00 N/A 0.433±0.00 0.478±0.00 0.201±0.00 0.089±0.00 0.315±0.00 0.042±0.00 0.433±0.00 0.042±0.00 0.732±0.63 N/A 0.319±0.11
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000045822 ENSMUST00000052107 1.854±0.17 1.900±0.21 2.411±0.00 3.540±1.50 1.815±0.17 2.102±0.23 0.599±0.24 1.099±0.28 1.222±0.91 1.949±0.05 0.628±0.12 2.566±0.73 4.714±1.45 10.935±2.55
ENSMUSG00000050373 ENSMUST00000056181 5.633±0.71 9.722±1.03 4.646±0.41 3.488±0.65 6.493±0.49 5.975±0.10 3.507±0.91 4.839±0.50 2.658±0.40 7.418±1.15 2.598±0.78 5.103±0.96 3.551±1.16 2.854±0.35
ENSMUST00000140519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172577 10.151±1.96 24.213±1.81 5.916±0.66 N/A 11.379±3.02 11.154±3.25 6.858±1.54 7.166±0.85 5.014±0.89 11.074±0.35 6.870±0.85 10.386±2.76 8.527±3.85 3.962±0.20
ENSMUST00000173945 N/A N/A 2.247±0.00 N/A 3.502±0.00 N/A N/A N/A N/A N/A 0.768±0.00 2.761±0.66 2.994±0.00 N/A
ENSMUST00000174070 6.400±1.11 13.261±3.92 N/A 8.849±1.34 6.356±0.54 11.046±2.44 N/A 5.360±0.00 N/A 8.731±1.88 5.789±0.58 11.687±1.68 8.627±0.29 N/A
ENSMUST00000174342 N/A N/A N/A 3.823±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.958±0.00

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