C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000030_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000205220-ENSG00000213398 CGP 9606 16:67934502-67944131
GeneTranscriptPositionBiotype
ENSG00000124067 (SLC12A4)
solute carrier family 12 (potassium/chloride transporter), member 4 		ENST00000316341 (SLC12A4-001) 67943474-67968694 protein_coding
ENST00000422611 (SLC12A4-201) 67943474-67968694 protein_coding
ENST00000537830 (SLC12A4-005) 67944593-67964065 protein_coding
ENST00000541864 (SLC12A4-004) 67944482-67966878 protein_coding
ENST00000570616 (SLC12A4-020) 67944738-67945405 nonsense_mediated_decay
ENST00000570802 (SLC12A4-018) 67944485-67968553 retained_intron
ENST00000571299 (SLC12A4-008) 67952216-67969601 protein_coding
ENST00000572010 (SLC12A4-003) 67952242-67969192 processed_transcript
ENST00000572037 (SLC12A4-007) 67944414-67968584 protein_coding
ENST00000572476 (SLC12A4-013) 67949571-67950421 retained_intron
ENST00000572766 (SLC12A4-011) 67949907-67951467 retained_intron
ENST00000573023 (SLC12A4-002) 67947101-67968654 retained_intron
ENST00000573702 (SLC12A4-015) 67950369-67951929 retained_intron
ENST00000574665 (SLC12A4-012) 67949799-67951534 retained_intron
ENST00000575857 (SLC12A4-014) 67945545-67947105 nonsense_mediated_decay
ENST00000576377 (SLC12A4-010) 67950993-67968616 nonsense_mediated_decay
ENST00000576462 (SLC12A4-009) 67957529-67968469 retained_intron
ENST00000576513 (SLC12A4-016) 67948061-67950112 retained_intron
ENST00000576616 (SLC12A4-017) 67944485-67968553 protein_coding
ENSG00000205220 (PSMB10)
proteasome (prosome, macropain) subunit, beta type, 10 		ENST00000358514 (PSMB10-001) 67934502-67937087 protein_coding
ENST00000570304 (PSMB10-005) 67935328-67936847 retained_intron
ENST00000570985 (PSMB10-003) 67934506-67935795 retained_intron
ENST00000574576 (PSMB10-004) 67934506-67935985 protein_coding
ENST00000575556 (PSMB10-002) 67935549-67936864 retained_intron
ENSG00000213398 (LCAT)
lecithin-cholesterol acyltransferase 		ENST00000264005 (LCAT-001) 67939750-67944131 protein_coding
ENST00000570369 (LCAT-008) 67939882-67943094 protein_coding
ENST00000570396 (LCAT-012) 67941817-67942458 protein_coding
ENST00000570980 (LCAT-004) 67940246-67943625 protein_coding
ENST00000573538 (LCAT-007) 67939882-67942930 nonsense_mediated_decay
ENST00000573846 (LCAT-006) 67942157-67942901 retained_intron
ENST00000575277 (LCAT-005) 67942399-67943144 retained_intron
ENST00000575467 (LCAT-003) 67941368-67944131 nonsense_mediated_decay
ENST00000576450 (LCAT-011) 67941809-67942577 protein_coding
CIL_000030_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031897-ENSMUSG00000035237 CGP 10090 8:105935728-105943382
GeneTranscriptPositionBiotype
ENSMUSG00000031897 (Psmb10)
proteasome (prosome, macropain) subunit, beta type 10 		ENSMUST00000034369 (Psmb10-201) 105935728-105938392 protein_coding
ENSMUSG00000035237 (Lcat)
lecithin cholesterol acyltransferase 		ENSMUST00000038896 (Lcat-001) 105939551-105943382 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000030_0001ENSG00000124067ENST00000316341ENST00000422611ENST00000537830ENST00000541864ENST00000570616ENST00000570802ENST00000571299ENST00000572010ENST00000572037ENST00000572476ENST00000572766ENST00000573023ENST00000573702ENST00000574665ENST00000575857ENST00000576377ENST00000576462ENST00000576513ENST00000576616ENSG00000205220ENST00000358514ENST00000570304ENST00000570985ENST00000574576ENST00000575556ENSG00000213398ENST00000264005ENST00000570369ENST00000570396ENST00000570980ENST00000573538ENST00000573846ENST00000575277ENST00000575467ENST00000576450CIL_000030_0002ENSMUSG00000031897ENSMUST00000034369ENSMUSG00000035237ENSMUST00000038896
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000030_0001ENSG00000124067ENST00000316341ENST00000422611ENST00000537830ENST00000541864ENST00000570802ENST00000572037ENST00000573023ENST00000576377ENST00000576462ENST00000576616ENSG00000205220ENST00000358514ENST00000570304ENST00000570985ENST00000574576ENSG00000213398ENST00000264005ENST00000570396ENST00000573538ENST00000575277CIL_000030_0002ENSMUSG00000031897ENSMUST00000034369ENSMUSG00000035237ENSMUST00000038896
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124067 ENST00000316341 8.661±0.00 N/A N/A 1.424±0.00 4.857±3.65 9.614±0.00 3.717±0.00 3.671±0.00 1.844±0.00 6.683±5.80 2.945±1.70 8.983±5.56 10.411±2.52 3.640±1.76
ENST00000422611 N/A 7.473±0.00 N/A N/A N/A N/A N/A N/A N/A 8.055±0.00 N/A N/A N/A N/A
ENST00000537830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.742±0.00
ENST00000541864 N/A N/A 1.178±0.00 0.738±0.00 2.556±0.00 N/A 0.719±0.00 N/A N/A N/A N/A 2.915±2.27 4.781±0.00 2.897±0.00
ENST00000570616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570802 N/A 5.153±0.00 N/A 1.889±0.00 6.030±0.00 N/A 2.998±0.00 3.554±0.00 N/A 0.929±0.00 N/A 0.590±0.00 N/A N/A
ENST00000571299 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572037 19.479±0.00 5.187±0.00 N/A 5.419±0.00 16.797±0.00 7.262±5.64 11.506±0.00 8.194±0.00 N/A 9.319±8.49 12.399±0.00 5.608±2.44 13.123±0.61 10.122±5.47
ENST00000572476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573023 N/A N/A N/A N/A 1.444±0.00 N/A 0.535±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000573702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576377 N/A N/A N/A N/A N/A N/A 2.260±0.00 N/A 5.745±0.00 N/A N/A 1.739±0.00 N/A N/A
ENST00000576462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.446±0.00 N/A N/A N/A
ENST00000576513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576616 N/A N/A N/A 0.429±0.00 N/A N/A 0.543±0.00 N/A 2.244±0.00 1.590±0.00 N/A 1.800±0.00 6.060±0.00 N/A
ENSG00000205220 ENST00000358514 N/A N/A N/A 0.750±0.00 1.263±0.00 2.727±0.00 0.638±0.00 N/A 1.516±0.00 3.585±0.00 N/A 23.231±22.66 N/A N/A
ENST00000570304 18.988±0.00 46.179±0.00 N/A N/A 4.673±0.00 7.083±4.05 N/A 18.679±12.38 3.295±0.00 36.724±0.00 N/A 14.227±0.00 37.915±5.64 N/A
ENST00000570985 N/A N/A N/A 13.253±8.69 41.759±0.00 17.961±0.00 16.818±14.84 21.446±13.68 14.252±9.92 67.505±0.00 10.282±0.10 37.066±13.91 56.809±20.19 15.850±0.00
ENST00000574576 20.445±0.00 65.437±0.00 N/A N/A N/A 13.408±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213398 ENST00000264005 N/A N/A N/A N/A N/A N/A N/A 28.805±0.00 40.617±0.00 N/A N/A N/A N/A N/A
ENST00000570369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570396 N/A N/A N/A N/A N/A N/A N/A 58.402±0.00 N/A N/A N/A N/A N/A N/A
ENST00000570980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573538 N/A N/A N/A N/A N/A N/A N/A N/A 20.889±0.00 N/A N/A N/A N/A N/A
ENST00000573846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.605±0.00 N/A N/A
ENST00000575467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031897 ENSMUST00000034369 32.119±9.82 48.308±1.64 22.593±4.81 8.756±3.64 63.945±29.87 113.392±23.54 17.359±3.12 20.952±2.99 31.534±9.06 52.819±13.36 3.720±0.91 29.588±11.13 4.094±1.44 1.403±0.65
ENSMUSG00000035237 ENSMUST00000038896 1.462±0.00 1.368±0.00 N/A 3.019±3.24 0.384±0.00 N/A N/A 0.332±0.00 275.999±200.61 N/A 0.312±0.12 2.159±0.00 5.430±6.03 0.432±0.24

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