C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 35, member F6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000414029 SLC35F6-003 ENSG00000213699 9606 + 2:26764325-26781147 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverLungMuscleOvaryPlacentaENST00000414029
Transcript ID Brain Kidney Liver Lung Muscle Ovary Placenta
ENST00000414029 2.729±0.00 4.844±2.62 4.031±0.00 1.232±0.00 3.302±2.75 2.119±0.42 4.309±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WF CIL_0007WF_0001 VISTA 2:26419781-27023232
CIL_00004N CIL_00004N_0001 CGP 2:26692690-26781231
CIL_00004O CIL_00004O_0001 CGP 2:26764284-26801067

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124474 Slc35f6-003 nonsense_mediated_decay Mus_musculus 0 1002
ENSMUST00000143867 Slc35f6-002 nonsense_mediated_decay Mus_musculus 0 819
ENSMUST00000062962 Slc35f6-001 protein_coding Mus_musculus 0 819

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