C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 35, member F6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000429494 SLC35F6-002 ENSG00000213699 9606 + 2:26764284-26781140 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000429494
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000429494 21.709±0.00 6.453±0.00 7.360±0.00 4.118±0.00 1.733±1.22 5.949±0.00 1.992±0.00 2.620±0.90 3.164±0.00 3.132±0.00 4.133±0.00 3.065±0.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WF CIL_0007WF_0001 VISTA 2:26419781-27023232
CIL_00004N CIL_00004N_0001 CGP 2:26692690-26781231
CIL_00004O CIL_00004O_0001 CGP 2:26764284-26801067

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000143867 Slc35f6-002 nonsense_mediated_decay Mus_musculus 0 1112
ENSMUST00000062962 Slc35f6-001 protein_coding Mus_musculus 0 1002
ENSMUST00000124474 Slc35f6-003 nonsense_mediated_decay Mus_musculus 0 819

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