C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00005M_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000123268-ENSG00000186452 CGP 9606 12:50763710-50887884
GeneTranscriptPositionBiotype
ENSG00000123268 (ATF1)
activating transcription factor 1
ENST00000262053 (ATF1-001) 50764292-50821122 protein_coding
ENST00000549612 (ATF1-005) 50764078-50809475 nonsense_mediated_decay
ENST00000551831 (ATF1-002) 50764480-50820010 nonsense_mediated_decay
ENST00000552487 (ATF1-004) 50764509-50814368 protein_coding
ENST00000552510 (ATF1-003) 50763710-50814192 protein_coding
ENSG00000186452 (TMPRSS12)
transmembrane (C-terminal) protease, serine 12
ENST00000398458 (TMPRSS12-001) 50842933-50887884 protein_coding
ENST00000551456 (TMPRSS12-002) 50842920-50887884 protein_coding
ENSG00000243075 (RN7SL519P)
RNA, 7SL, cytoplasmic 519, pseudogene
ENST00000497925 (RN7SL519P-201) 50841498-50841785 misc_RNA
ENSG00000271490 (RP11-60E8.4)
ENST00000603396 (RP11-60E8.4-001) 50806335-50806437 processed_pseudogene
CIL_00005M_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023027-ENSMUSG00000045631 CGP 10090 15:100227819-100293053
GeneTranscriptPositionBiotype
ENSMUSG00000023027 (Atf1)
activating transcription factor 1
ENSMUST00000023769 (Atf1-001) 100227819-100261244 protein_coding
ENSMUST00000163855 (Atf1-006) 100227871-100254448 protein_coding
ENSMUST00000165804 (Atf1-004) 100232159-100252094 protein_coding
ENSMUST00000166435 (Atf1-009) 100254215-100259912 protein_coding
ENSMUST00000166809 (Atf1-007) 100232171-100233013 retained_intron
ENSMUST00000168103 (Atf1-003) 100232751-100260123 processed_transcript
ENSMUST00000169408 (Atf1-002) 100232733-100260080 nonsense_mediated_decay
ENSMUST00000171869 (Atf1-008) 100228263-100232814 protein_coding
ENSMUST00000172154 (Atf1-005) 100232198-100254384 protein_coding
ENSMUSG00000045631 (Tmprss12)
transmembrane (C-terminal) protease, serine 12
ENSMUST00000096200 (Tmprss12-201) 100280837-100293053 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00005M_0001ENSG00000123268ENST00000262053ENST00000549612ENST00000551831ENST00000552487ENST00000552510ENSG00000186452ENST00000398458ENST00000551456ENSG00000243075ENST00000497925ENSG00000271490ENST00000603396CIL_00005M_0002ENSMUSG00000023027ENSMUST00000023769ENSMUST00000163855ENSMUST00000165804ENSMUST00000166435ENSMUST00000166809ENSMUST00000168103ENSMUST00000169408ENSMUST00000171869ENSMUST00000172154ENSMUSG00000045631ENSMUST00000096200
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00005M_0001ENSG00000123268ENST00000262053ENST00000549612ENST00000551831ENST00000552487ENST00000552510ENSG00000186452ENST00000398458ENST00000551456ENSG00000243075ENST00000497925ENSG00000271490ENST00000603396CIL_00005M_0002ENSMUSG00000023027ENSMUST00000023769ENSMUST00000163855ENSMUST00000166435ENSMUST00000168103ENSMUST00000169408ENSMUST00000172154ENSMUSG00000045631ENSMUST00000096200
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000123268 ENST00000262053 6.297±0.00 3.358±0.00 1.052±0.00 2.012±0.00 1.857±0.36 5.330±0.00 1.715±0.82 4.487±3.24 1.347±0.00 3.664±0.00 2.496±1.92 3.686±0.78 3.305±0.20 2.098±0.33
ENST00000549612 N/A N/A 2.714±0.00 1.664±0.00 6.018±0.00 4.702±0.00 N/A N/A 3.454±0.00 3.395±0.00 12.990±0.00 5.983±0.00 N/A N/A
ENST00000551831 N/A N/A 1.628±0.00 N/A 1.176±0.00 N/A 2.030±0.00 7.520±0.00 N/A N/A 1.575±0.00 N/A N/A N/A
ENST00000552487 N/A N/A N/A N/A 2.676±0.00 N/A N/A N/A 2.764±0.00 N/A N/A 8.047±0.00 N/A 3.810±0.00
ENST00000552510 N/A N/A N/A 1.984±0.00 N/A N/A N/A N/A 3.703±0.00 N/A N/A N/A N/A N/A
ENSG00000186452 ENST00000398458 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.044±0.00 N/A N/A 0.042±0.01 11.043±3.93
ENST00000551456 0.006±0.00 0.050±0.00 0.043±0.00 0.023±0.00 0.033±0.00 0.007±0.00 0.038±0.01 0.030±0.00 0.023±0.00 0.118±0.08 0.002±0.00 0.011±0.01 N/A N/A
ENSG00000243075 ENST00000497925 N/A 0.052±0.00 N/A N/A N/A 0.095±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000271490 ENST00000603396 N/A 0.210±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023027 ENSMUST00000023769 9.073±4.11 21.288±3.89 14.212±1.66 4.260±2.11 7.298±4.79 10.030±2.10 6.835±1.08 8.507±3.85 16.892±10.93 13.249±3.17 13.025±0.73 13.751±3.31 13.433±6.25 13.495±5.84
ENSMUST00000163855 5.507±1.45 13.676±0.00 N/A N/A 4.336±0.18 N/A N/A N/A N/A N/A N/A 8.130±1.75 N/A N/A
ENSMUST00000165804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166435 N/A N/A N/A 20.969±0.00 N/A N/A N/A N/A N/A N/A N/A 119.494±0.00 91.576±1.10 110.057±0.00
ENSMUST00000166809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168103 6.473±1.15 14.856±4.46 N/A N/A 12.551±6.20 8.586±1.43 9.258±2.41 7.508±1.84 11.087±1.17 8.945±0.17 N/A 15.883±4.36 N/A 50.004±16.42
ENSMUST00000169408 N/A N/A N/A 3.396±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 15.467±1.40 17.348±0.00
ENSMUST00000171869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172154 N/A N/A N/A N/A 5.863±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 29.809±1.32
ENSMUSG00000045631 ENSMUST00000096200 N/A N/A N/A 0.027±0.00 N/A 0.153±0.06 N/A 0.065±0.04 N/A N/A N/A 0.136±0.02 0.094±0.00 16.440±3.59

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