C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: activating transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172154 Atf1-005 ENSMUSG00000023027 10090 + 15:100232198-100254384 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastTestisENSMUST00000172154
Transcript ID Breast Testis
ENSMUST00000172154 5.863±0.00 29.809±1.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000062 CIL_000062_0002 CGP 15:100038664-100261244
CIL_00005M CIL_00005M_0002 CGP 15:100227819-100293053

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0005634 ISO nucleus
GO:0005667 IDA transcription factor complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262053 ATF1-001 protein_coding Homo_sapiens 0 628
ENST00000549612 ATF1-005 nonsense_mediated_decay Homo_sapiens 2e-18 97
ENST00000551831 ATF1-002 nonsense_mediated_decay Homo_sapiens 4e-17 94
ENST00000552487 ATF1-004 protein_coding Homo_sapiens 0 634
ENST00000552510 ATF1-003 protein_coding Homo_sapiens 0 590

Loading