C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000ZR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000146540-ENSG00000146540 CGP 9606 7:996986-1138260
GeneTranscriptPositionBiotype
ENSG00000146540 (C7orf50)
chromosome 7 open reading frame 50 		ENST00000357429 (C7orf50-001) 996986-1138257 protein_coding
ENST00000397098 (C7orf50-002) 997006-1138240 protein_coding
ENST00000397100 (C7orf50-201) 996987-1138257 protein_coding
ENST00000412051 (C7orf50-003) 997016-1028339 protein_coding
ENST00000444428 (C7orf50-005) 997607-1055306 protein_coding
ENST00000465681 (C7orf50-004) 1024502-1028352 retained_intron
ENST00000488073 (C7orf50-006) 997494-1127388 processed_transcript
ENST00000491163 (C7orf50-007) 997633-1138260 protein_coding
ENSG00000164850 (GPER1)
G protein-coupled estrogen receptor 1 		ENST00000297469 (GPER1-030) 1086876-1093815 protein_coding
ENST00000397088 (GPER1-031) 1088087-1093810 protein_coding
ENST00000397092 (GPER1-201) 1086807-1093815 protein_coding
ENST00000401670 (GPER1-032) 1082208-1092881 protein_coding
ENST00000413368 (GPER1-033) 1086807-1091949 protein_coding
ENST00000617001 (GPER1-202) 1091628-1093809 protein_coding
ENST00000619052 (GPER1-203) 1092938-1093741 protein_coding
ENSG00000199023 (MIR339)
microRNA 339 		ENST00000362153 (MIR339-201) 1022935-1023045 miRNA
ENSG00000224079 (AC091729.7)
 ENST00000449721 (AC091729.7-001) 1074450-1078036 antisense
ENSG00000225146 (AC073957.15)
 ENST00000418941 (AC073957.15-001) 1029025-1043891 antisense
ENSG00000226291 (AC091729.8)
 ENST00000415656 (AC091729.8-001) 1080863-1082178 antisense
ENSG00000257607 (RP11-449P15.1)
 ENST00000549241 (RP11-449P15.1-001) 1055360-1059261 antisense
CIL_0000ZR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000053553-ENSMUSG00000053553 CGP 10090 5:139359739-139460502
GeneTranscriptPositionBiotype
ENSMUSG00000044092 (C130050O18Rik)
RIKEN cDNA C130050O18 gene 		ENSMUST00000052176 (C130050O18Rik-002) 139406387-139415618 protein_coding
ENSMUST00000163940 (C130050O18Rik-001) 139405280-139415621 protein_coding
ENSMUST00000164078 (C130050O18Rik-003) 139406465-139415623 nonsense_mediated_decay
ENSMUSG00000044197 (Gpr146)
G protein-coupled receptor 146 		ENSMUST00000051293 (Gpr146-001) 139380581-139396415 protein_coding
ENSMUST00000053120 (Gpr146-201) 139378220-139379259 protein_coding
ENSMUST00000100514 (Gpr146-002) 139389785-139396414 protein_coding
ENSMUST00000137254 (Gpr146-004) 139377742-139380054 processed_transcript
ENSMUST00000138631 (Gpr146-003) 139378163-139392763 protein_coding
ENSMUST00000188655 (Gpr146-005) 139377697-139380053 processed_transcript
ENSMUSG00000053553 (3110082I17Rik)
RIKEN cDNA 3110082I17 gene 		ENSMUST00000066052 (3110082I17Rik-001) 139359739-139460502 protein_coding
ENSMUSG00000053647 (Gper1)
G protein-coupled estrogen receptor 1 		ENSMUST00000066211 (Gper1-001) 139423151-139427800 protein_coding
ENSMUST00000173364 (Gper1-002) 139423280-139425889 processed_transcript
ENSMUSG00000065593 (Mir339)
microRNA 339 		ENSMUST00000083659 (Mir339-201) 139369650-139369745 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ZR_0001ENSG00000146540ENST00000357429ENST00000397098ENST00000397100ENST00000412051ENST00000444428ENST00000465681ENST00000488073ENST00000491163ENSG00000164850ENST00000297469ENST00000397088ENST00000397092ENST00000401670ENST00000413368ENST00000617001ENST00000619052ENSG00000199023ENST00000362153ENSG00000224079ENST00000449721ENSG00000225146ENST00000418941ENSG00000226291ENST00000415656ENSG00000257607ENST00000549241CIL_0000ZR_0002ENSMUSG00000044092ENSMUST00000052176ENSMUST00000163940ENSMUST00000164078ENSMUSG00000044197ENSMUST00000051293ENSMUST00000053120ENSMUST00000100514ENSMUST00000137254ENSMUST00000138631ENSMUST00000188655ENSMUSG00000053553ENSMUST00000066052ENSMUSG00000053647ENSMUST00000066211ENSMUST00000173364ENSMUSG00000065593ENSMUST00000083659
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ZR_0001ENSG00000146540ENST00000357429ENST00000397098ENST00000397100ENST00000412051ENST00000444428ENST00000465681ENST00000491163ENSG00000164850ENST00000297469ENST00000397088ENST00000397092ENST00000401670ENST00000413368ENST00000617001ENST00000619052ENSG00000199023ENST00000362153ENSG00000224079ENST00000449721ENSG00000225146ENST00000418941ENSG00000226291ENST00000415656ENSG00000257607ENST00000549241CIL_0000ZR_0002ENSMUSG00000044092ENSMUST00000052176ENSMUST00000163940ENSMUST00000164078ENSMUSG00000044197ENSMUST00000051293ENSMUST00000100514ENSMUSG00000053553ENSMUST00000066052ENSMUSG00000053647ENSMUST00000066211ENSMUST00000173364ENSMUSG00000065593ENSMUST00000083659
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000146540 ENST00000357429 N/A N/A N/A N/A 1.394±0.00 1.136±0.00 N/A 6.945±0.00 2.587±0.00 N/A N/A 9.259±0.00 12.896±3.58 7.664±0.00
ENST00000397098 N/A N/A N/A 1.433±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000397100 N/A N/A N/A 4.133±0.00 N/A N/A N/A N/A N/A 1.353±0.00 4.602±0.00 41.946±0.00 17.056±0.00 N/A
ENST00000412051 32.852±0.00 28.635±0.00 1.313±0.00 24.146±17.70 46.938±0.00 16.616±15.38 12.991±11.20 18.089±17.24 5.123±3.19 14.614±13.45 11.880±0.00 32.902±23.61 35.166±9.41 29.652±8.45
ENST00000444428 N/A N/A N/A N/A N/A N/A 1.213±0.00 N/A N/A N/A N/A N/A N/A 10.256±0.00
ENST00000465681 N/A N/A N/A N/A 0.871±0.00 N/A 0.266±0.00 N/A 0.709±0.00 N/A N/A N/A N/A N/A
ENST00000488073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491163 N/A N/A N/A N/A N/A 1.598±0.00 N/A 1.269±0.00 N/A N/A N/A 31.960±28.86 41.749±0.00 21.001±0.00
ENSG00000164850 ENST00000297469 0.271±0.00 1.264±0.00 N/A 0.746±0.00 1.567±0.00 1.421±0.00 N/A 1.118±0.00 N/A N/A N/A 0.518±0.07 1.814±0.53 0.609±0.35
ENST00000397088 N/A 2.506±0.00 0.300±0.00 0.740±0.31 4.969±0.00 1.779±1.34 1.082±0.00 2.014±0.58 3.624±3.11 1.443±1.07 N/A 0.984±0.05 4.874±2.95 1.081±0.55
ENST00000397092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.652±0.00 2.100±0.00 N/A
ENST00000401670 0.596±0.00 N/A N/A N/A N/A 1.071±0.00 0.595±0.00 N/A N/A N/A 0.163±0.00 N/A N/A N/A
ENST00000413368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.293±0.00
ENST00000617001 1.113±0.00 N/A N/A 1.061±0.40 2.125±1.45 2.926±0.00 0.531±0.00 N/A 1.642±0.88 0.722±0.40 N/A 0.897±0.69 2.448±1.45 0.877±0.00
ENST00000619052 N/A N/A N/A N/A N/A N/A 1.047±0.00 N/A N/A 0.768±0.00 N/A N/A N/A N/A
ENSG00000199023 ENST00000362153 N/A 0.377±0.00 N/A N/A N/A N/A N/A 0.795±0.00 N/A N/A N/A 29.668±0.00 N/A N/A
ENSG00000224079 ENST00000449721 N/A 0.034±0.00 N/A 0.100±0.02 0.038±0.00 0.102±0.00 N/A N/A 0.066±0.00 0.058±0.00 N/A 0.054±0.00 0.106±0.03 1.675±0.63
ENSG00000225146 ENST00000418941 0.172±0.00 0.046±0.00 N/A 0.107±0.00 N/A N/A N/A N/A N/A N/A N/A 0.110±0.00 0.101±0.00 0.230±0.10
ENSG00000226291 ENST00000415656 N/A N/A N/A 0.287±0.00 N/A N/A N/A 1.505±0.00 0.329±0.00 N/A N/A N/A 0.692±0.00 N/A
ENSG00000257607 ENST00000549241 24.504±0.00 28.368±0.00 0.996±0.00 9.768±0.00 15.813±14.36 6.037±5.55 4.120±3.68 3.565±1.53 5.477±3.85 7.221±4.24 7.984±0.00 5.730±5.10 22.440±10.50 8.155±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000044092 ENSMUST00000052176 0.591±0.16 0.778±0.21 N/A 0.131±0.01 0.503±0.16 0.947±0.21 0.185±0.05 1.197±0.35 0.473±0.21 2.258±0.69 0.117±0.07 0.544±0.34 0.190±0.05 0.180±0.08
ENSMUST00000163940 0.786±0.00 0.137±0.00 0.181±0.01 0.123±0.00 0.566±0.12 N/A 0.220±0.07 0.311±0.07 0.382±0.21 0.995±0.60 N/A 0.474±0.19 0.091±0.00 N/A
ENSMUST00000164078 N/A 0.101±0.03 N/A N/A 0.194±0.04 0.134±0.06 0.067±0.00 N/A 0.062±0.03 0.264±0.00 0.035±0.00 0.163±0.09 0.051±0.03 0.078±0.03
ENSMUSG00000044197 ENSMUST00000051293 20.111±6.72 18.983±1.77 8.440±0.65 1.170±1.04 27.423±3.82 3.163±0.36 22.605±2.42 17.105±1.58 18.424±10.22 35.737±5.41 9.382±1.29 12.049±4.61 3.372±1.08 0.390±0.18
ENSMUST00000053120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000100514 N/A N/A N/A 0.160±0.06 N/A 1.208±0.42 N/A N/A 3.623±1.70 7.575±3.34 N/A 1.959±0.68 0.412±0.04 0.148±0.01
ENSMUST00000137254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000053553 ENSMUST00000066052 4.749±1.98 3.341±1.62 6.437±0.85 5.803±0.79 2.684±1.33 2.630±0.97 1.409±0.17 1.888±0.75 6.264±5.70 2.884±0.67 3.537±0.59 9.030±2.36 9.613±6.17 11.188±8.01
ENSMUSG00000053647 ENSMUST00000066211 1.634±0.62 2.281±0.66 0.452±0.05 1.592±0.53 0.811±0.27 1.058±0.26 0.716±0.13 0.949±0.23 0.050±0.04 0.733±0.22 0.458±0.16 1.190±0.51 0.062±0.02 0.090±0.02
ENSMUST00000173364 N/A N/A N/A N/A N/A N/A N/A N/A 0.121±0.00 N/A N/A 0.773±0.00 0.322±0.00 0.197±0.00
ENSMUSG00000065593 ENSMUST00000083659 N/A N/A N/A N/A 7870.480±0.00 N/A N/A N/A 9207.930±0.00 N/A N/A N/A N/A N/A

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