C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: estrogen-related receptor gamma a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000126966 esrrga-201 ENSDARG00000004861 7955 - 17:29853913-29961100 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000126966
Transcript ID Brain Heart Kidney Muscle
ENSDART00000126966 11.143±0.70 6.819±1.66 0.522±0.02 0.446±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000127 CIL_000127_0001 CGP 17:29435964-29961297
CIL_0007JY CIL_0007JY_0004 UCNEbase 17:29456098-30423974

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0008270 IEA zinc ion binding
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021680 Esrrb-006 protein_coding Mus_musculus 0 309
ENSMUST00000027906 Esrrg-001 protein_coding Mus_musculus 0 968
ENSMUST00000110203 Esrrb-003 protein_coding Mus_musculus 0 309
ENSMUST00000110204 Esrrb-002 protein_coding Mus_musculus 0 309
ENSMUST00000110938 Esrrg-002 protein_coding Mus_musculus 0 966
ENSMUST00000110939 Esrrg-003 protein_coding Mus_musculus 0 974
ENSMUST00000116402 Esrrb-001 protein_coding Mus_musculus 0 309
ENSMUST00000167891 Esrrb-005 protein_coding Mus_musculus 0 309
ENST00000359162 ESRRG-004 protein_coding Homo_sapiens 0 265
ENST00000360012 ESRRG-005 protein_coding Homo_sapiens 0 265
ENST00000361395 ESRRG-002 protein_coding Homo_sapiens 0 265
ENST00000361525 ESRRG-201 protein_coding Homo_sapiens 0 268
ENST00000366937 ESRRG-006 protein_coding Homo_sapiens 0 265
ENST00000366938 ESRRG-007 protein_coding Homo_sapiens 0 265
ENST00000366940 ESRRG-003 protein_coding Homo_sapiens 0 268
ENST00000380887 ESRRB-003 protein_coding Homo_sapiens 0 695
ENST00000391890 ESRRG-202 protein_coding Homo_sapiens 0 268
ENST00000408911 ESRRG-001 protein_coding Homo_sapiens 0 265
ENST00000493603 ESRRG-010 protein_coding Homo_sapiens 0 265
ENST00000505752 ESRRB-001 nonsense_mediated_decay Homo_sapiens 0 693
ENST00000509242 ESRRB-201 protein_coding Homo_sapiens 0 695
ENST00000512784 ESRRB-002 protein_coding Homo_sapiens 0 695
ENST00000556177 ESRRB-006 protein_coding Homo_sapiens 0 699
ENST00000616180 ESRRG-203 protein_coding Homo_sapiens 0 268

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