C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001CR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000128045-ENSG00000184178 CGP 9606 4:52862290-53366075
GeneTranscriptPositionBiotype
ENSG00000128045 (RASL11B)
RAS-like, family 11, member B
ENST00000248706 (RASL11B-001) 52862290-52866835 protein_coding
ENST00000505041 (RASL11B-002) 52864146-52866799 processed_transcript
ENST00000515677 (RASL11B-003) 52862332-52863610 retained_intron
ENSG00000184178 (SCFD2)
sec1 family domain containing 2
ENST00000388940 (SCFD2-002) 52873788-53366061 protein_coding
ENST00000401642 (SCFD2-001) 52872982-53366075 protein_coding
ENST00000503450 (SCFD2-003) 53352598-53366066 protein_coding
ENST00000611795 (SCFD2-201) 53273579-53365941 protein_coding
ENSG00000248115 (RP11-752D24.2)
ENST00000504048 (RP11-752D24.2-003) 52945666-52948752 antisense
ENST00000508813 (RP11-752D24.2-002) 52945689-52958087 antisense
ENST00000510351 (RP11-752D24.2-001) 52945649-52951022 antisense
CIL_0001CR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049907-ENSMUSG00000062110 CGP 10090 5:74195288-74531747
GeneTranscriptPositionBiotype
ENSMUSG00000049907 (Rasl11b)
RAS-like, family 11, member B
ENSMUST00000051937 (Rasl11b-001) 74195288-74199481 protein_coding
ENSMUST00000183995 (Rasl11b-002) 74195445-74196290 retained_intron
ENSMUSG00000062110 (Scfd2)
Sec1 family domain containing 2
ENSMUST00000072857 (Scfd2-001) 74204816-74531742 protein_coding
ENSMUST00000075848 (Scfd2-005) 74447780-74531747 nonsense_mediated_decay
ENSMUST00000113542 (Scfd2-002) 74206093-74531619 protein_coding
ENSMUST00000121330 (Scfd2-003) 74206128-74531742 protein_coding
ENSMUST00000123203 (Scfd2-006) 74515163-74531742 processed_transcript
ENSMUST00000142216 (Scfd2-007) 74458373-74479126 processed_transcript
ENSMUST00000146015 (Scfd2-009) 74206089-74225484 retained_intron
ENSMUST00000148994 (Scfd2-008) 74395135-74397738 processed_transcript
ENSMUST00000151474 (Scfd2-004) 74456260-74531747 protein_coding
ENSMUSG00000080700 (Gm15981)
predicted gene 15981
ENSMUST00000119196 (Gm15981-001) 74316566-74317029 processed_pseudogene
ENSMUSG00000084132 (Gm15982)
predicted gene 15982
ENSMUST00000121681 (Gm15982-001) 74356566-74358415 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001CR_0001ENSG00000128045ENST00000248706ENST00000505041ENST00000515677ENSG00000184178ENST00000388940ENST00000401642ENST00000503450ENST00000611795ENSG00000248115ENST00000504048ENST00000508813ENST00000510351CIL_0001CR_0002ENSMUSG00000049907ENSMUST00000051937ENSMUST00000183995ENSMUSG00000062110ENSMUST00000072857ENSMUST00000075848ENSMUST00000113542ENSMUST00000121330ENSMUST00000123203ENSMUST00000142216ENSMUST00000146015ENSMUST00000148994ENSMUST00000151474ENSMUSG00000080700ENSMUST00000119196ENSMUSG00000084132ENSMUST00000121681
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001CR_0001ENSG00000128045ENST00000248706ENST00000505041ENSG00000184178ENST00000388940ENST00000401642ENST00000503450ENST00000611795ENSG00000248115ENST00000504048ENST00000508813ENST00000510351CIL_0001CR_0002ENSMUSG00000049907ENSMUST00000051937ENSMUSG00000062110ENSMUST00000072857ENSMUST00000075848ENSMUST00000113542ENSMUST00000121330ENSMUST00000123203ENSMUST00000146015ENSMUST00000151474ENSMUSG00000080700ENSMUST00000119196ENSMUSG00000084132ENSMUST00000121681
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000128045 ENST00000248706 0.411±0.00 2.392±0.00 0.784±0.00 5.378±2.31 0.130±0.00 0.666±0.00 1.425±0.00 11.832±0.00 0.168±0.00 0.249±0.15 0.208±0.09 6.899±5.14 10.468±0.20 7.036±3.87
ENST00000505041 N/A N/A 0.666±0.00 N/A 0.142±0.10 0.055±0.00 0.036±0.00 0.070±0.00 0.390±0.00 N/A N/A 0.364±0.00 N/A N/A
ENST00000515677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000184178 ENST00000388940 2.897±0.00 3.030±0.00 N/A 2.612±0.95 3.079±0.00 1.529±0.54 0.714±0.51 2.255±0.00 1.412±0.14 1.594±0.56 1.345±0.31 1.621±0.52 2.489±0.18 1.169±0.59
ENST00000401642 0.609±0.00 N/A N/A 1.024±0.00 2.655±0.00 0.968±0.00 0.366±0.00 1.628±0.00 1.035±0.00 0.782±0.00 N/A 3.093±0.40 2.486±0.93 0.977±0.00
ENST00000503450 N/A N/A 2.147±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611795 N/A N/A 1.027±0.00 0.720±0.00 N/A 3.022±0.00 1.279±0.00 2.494±0.00 1.696±0.00 1.236±0.00 2.199±0.00 2.495±0.00 N/A 1.049±0.00
ENSG00000248115 ENST00000504048 N/A N/A 0.706±0.00 0.120±0.00 N/A N/A 0.208±0.00 N/A 0.113±0.00 0.518±0.00 N/A N/A 0.066±0.00 0.359±0.00
ENST00000508813 N/A N/A N/A N/A 0.105±0.00 0.296±0.00 N/A 0.036±0.00 0.015±0.00 N/A N/A 0.219±0.00 N/A N/A
ENST00000510351 N/A 0.010±0.00 N/A 0.096±0.00 0.029±0.02 0.137±0.00 0.164±0.00 0.049±0.00 0.063±0.05 0.271±0.00 N/A 0.083±0.07 0.055±0.03 0.380±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000049907 ENSMUST00000051937 9.186±2.81 24.452±0.82 45.301±8.78 11.148±9.17 5.547±2.01 10.192±0.87 15.246±1.03 20.833±1.51 3.466±0.45 19.126±2.73 1.460±0.28 27.479±7.81 11.258±5.23 1.948±0.78
ENSMUST00000183995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000062110 ENSMUST00000072857 1.296±0.36 2.191±0.11 1.378±0.18 1.683±0.15 1.364±0.70 1.256±0.34 N/A 1.075±0.27 1.037±0.37 1.401±0.13 0.809±0.24 1.421±0.62 0.782±0.27 1.187±0.21
ENSMUST00000075848 1.267±0.11 2.104±0.46 N/A N/A 1.445±0.32 1.513±0.36 0.429±0.00 0.801±0.31 0.617±0.07 0.970±0.29 N/A 1.945±1.09 N/A N/A
ENSMUST00000113542 N/A N/A 0.586±0.00 0.947±0.00 3.160±0.00 N/A 0.900±0.10 0.716±0.07 0.836±0.47 0.735±0.00 0.926±0.15 1.821±0.40 1.378±0.48 2.435±0.17
ENSMUST00000121330 2.086±0.40 1.888±0.40 1.331±0.49 2.293±1.22 2.170±1.08 1.811±1.21 1.664±0.32 1.674±0.62 1.471±0.42 1.828±0.26 1.002±0.18 1.854±0.57 2.140±0.71 1.306±0.14
ENSMUST00000123203 N/A 4.085±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146015 N/A N/A N/A N/A N/A N/A 2.274±0.17 3.300±0.37 N/A N/A 2.196±0.31 4.792±0.00 5.093±1.02 5.412±1.68
ENSMUST00000148994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151474 0.660±0.00 1.055±0.00 0.325±0.00 N/A 0.759±0.00 0.659±0.10 N/A 0.386±0.02 0.439±0.14 0.500±0.05 N/A 0.740±0.29 0.420±0.00 N/A
ENSMUSG00000080700 ENSMUST00000119196 N/A 0.215±0.00 0.037±0.01 0.337±0.00 0.220±0.05 0.384±0.00 0.109±0.00 N/A 1.072±0.95 0.121±0.00 0.127±0.00 0.440±0.03 0.136±0.03 0.156±0.06
ENSMUSG00000084132 ENSMUST00000121681 0.072±0.00 N/A 0.051±0.03 0.046±0.03 0.331±0.24 N/A N/A 0.162±0.12 0.762±0.66 0.173±0.10 0.095±0.01 0.167±0.06 0.113±0.09 0.077±0.00

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