C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001GD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000029772-ENSDARG00000006518 CGP 7955 14:43308398-43490360
GeneTranscriptPositionBiotype
ENSDARG00000006518 (afap1l1a)
actin filament associated protein 1-like 1a 		ENSDART00000020328 (afap1l1a-201) 43420417-43490360 protein_coding
ENSDARG00000029772 (ablim3)
actin binding LIM protein family, member 3 		ENSDART00000041834 (ablim3-201) 43308398-43418987 protein_coding
ENSDART00000052595 (ablim3-202) 43308398-43418987 protein_coding
CIL_0001GD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000087298-ENSDARG00000087755 CGP 7955 14:43528737-43709548
GeneTranscriptPositionBiotype
ENSDARG00000080714 (CR457461.1)
 ENSDART00000117437 (CR457461.1-201) 43707194-43707280 miRNA
ENSDARG00000087298 (ABLIM3 (2 of 3))
actin binding LIM protein family, member 3 		ENSDART00000052589 (ABLIM3 (2 of 3)-202) 43528737-43639005 protein_coding
ENSDART00000060067 (ABLIM3 (2 of 3)-201) 43528737-43639005 protein_coding
ENSDARG00000087755 (AFAP1L1 (3 of 4))
actin filament associated protein 1-like 1 		ENSDART00000105652 (AFAP1L1 (3 of 4)-201) 43678725-43709548 protein_coding
CIL_0001GD_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000173210-ENSG00000157510 CGP 9606 5:149141483-149341802
GeneTranscriptPositionBiotype
ENSG00000157510 (AFAP1L1)
actin filament associated protein 1-like 1 		ENST00000296721 (AFAP1L1-001) 149271871-149341802 protein_coding
ENST00000455574 (AFAP1L1-003) 149271871-149312375 retained_intron
ENST00000508444 (AFAP1L1-005) 149301191-149302668 retained_intron
ENST00000513665 (AFAP1L1-004) 149315640-149341802 retained_intron
ENST00000515000 (AFAP1L1-002) 149271919-149340121 protein_coding
ENST00000522492 (AFAP1L1-006) 149271895-149307613 processed_transcript
ENSG00000173210 (ABLIM3)
actin binding LIM protein family, member 3 		ENST00000309868 (ABLIM3-001) 149141503-149260439 protein_coding
ENST00000326685 (ABLIM3-006) 149141483-149260542 protein_coding
ENST00000356541 (ABLIM3-201) 149243348-149258457 protein_coding
ENST00000502855 (ABLIM3-010) 149252344-149258574 retained_intron
ENST00000504238 (ABLIM3-004) 149141821-149260439 protein_coding
ENST00000506113 (ABLIM3-002) 149141614-149260439 protein_coding
ENST00000508983 (ABLIM3-005) 149142047-149258413 protein_coding
ENST00000514212 (ABLIM3-009) 149233253-149242584 retained_intron
ENST00000515171 (ABLIM3-003) 149141751-149260439 nonsense_mediated_decay
ENST00000515796 (ABLIM3-008) 149183549-149200620 retained_intron
ENST00000517451 (ABLIM3-011) 149243348-149258457 protein_coding
ENST00000519549 (ABLIM3-012) 149237448-149240617 processed_transcript
ENSG00000253406 (AC012613.2)
 ENST00000523176 (AC012613.2-001) 149216523-149276805 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GD_0001ENSDARG00000006518ENSDART00000020328ENSDARG00000029772ENSDART00000041834ENSDART00000052595CIL_0001GD_0002ENSDARG00000080714ENSDART00000117437ENSDARG00000087298ENSDART00000052589ENSDART00000060067ENSDARG00000087755ENSDART00000105652CIL_0001GD_0003ENSG00000157510ENST00000296721ENST00000455574ENST00000508444ENST00000513665ENST00000515000ENST00000522492ENSG00000173210ENST00000309868ENST00000326685ENST00000356541ENST00000502855ENST00000504238ENST00000506113ENST00000508983ENST00000514212ENST00000515171ENST00000515796ENST00000517451ENST00000519549ENSG00000253406ENST00000523176
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GD_0001ENSDARG00000006518ENSDART00000020328ENSDARG00000029772ENSDART00000041834CIL_0001GD_0002ENSDARG00000080714ENSDART00000117437ENSDARG00000087298ENSDART00000052589ENSDARG00000087755ENSDART00000105652CIL_0001GD_0003ENSG00000157510ENST00000296721ENST00000455574ENST00000513665ENST00000515000ENSG00000173210ENST00000309868ENST00000326685ENST00000504238ENST00000506113ENST00000508983ENST00000515171ENSG00000253406ENST00000523176
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006518 ENSDART00000020328 N/A N/A N/A 0.109±0.07 N/A N/A 0.128±0.04 0.737±0.58 0.074±0.00 N/A N/A N/A N/A N/A
ENSDARG00000029772 ENSDART00000041834 N/A N/A N/A 0.060±0.03 N/A N/A 0.159±0.14 0.056±0.00 N/A N/A 0.052±0.00 N/A N/A N/A
ENSDART00000052595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000080714 ENSDART00000117437 N/A N/A N/A 44.637±0.00 N/A N/A 5.138±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000087298 ENSDART00000052589 N/A N/A N/A 0.144±0.04 N/A N/A 0.339±0.10 0.029±0.00 N/A N/A 0.053±0.00 N/A N/A N/A
ENSDART00000060067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000087755 ENSDART00000105652 N/A N/A N/A 0.059±0.01 N/A N/A 0.107±0.07 0.405±0.20 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000157510 ENST00000296721 24.316±0.00 6.599±0.00 N/A 0.328±0.00 5.673±3.89 2.021±1.68 5.430±3.39 2.603±0.00 0.945±0.02 7.221±5.14 6.229±0.00 2.954±1.33 11.712±7.00 3.797±0.00
ENST00000455574 N/A N/A N/A 0.222±0.00 N/A 0.383±0.00 N/A 1.206±0.00 N/A N/A N/A N/A N/A N/A
ENST00000508444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513665 N/A 2.464±0.00 N/A 0.345±0.00 N/A 1.557±0.00 N/A 0.279±0.00 N/A N/A N/A 2.124±0.00 6.594±0.00 1.138±0.00
ENST00000515000 N/A N/A N/A 0.113±0.00 N/A 0.355±0.00 0.992±0.00 N/A N/A 7.052±0.00 2.859±0.00 5.373±0.00 15.937±0.00 2.527±0.00
ENST00000522492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000173210 ENST00000309868 N/A N/A N/A 1.703±0.20 N/A N/A N/A N/A N/A N/A 11.177±0.00 N/A N/A N/A
ENST00000326685 35.101±0.00 6.624±0.00 N/A 0.727±0.00 12.989±0.00 11.630±0.00 6.168±3.61 9.195±0.00 14.292±13.67 4.467±2.44 1.882±1.26 1.250±0.57 15.610±6.76 2.271±1.31
ENST00000356541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504238 33.938±0.00 6.127±0.00 N/A 4.540±0.00 8.417±7.59 5.720±5.17 1.524±0.00 8.888±0.00 N/A 3.915±0.00 N/A 1.154±0.27 N/A 3.320±0.00
ENST00000506113 N/A N/A N/A N/A N/A N/A 4.806±3.21 1.102±0.00 N/A N/A N/A N/A N/A N/A
ENST00000508983 N/A N/A 1.233±0.00 N/A N/A 0.293±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515171 20.582±0.00 N/A N/A N/A N/A 3.721±3.60 1.031±0.00 N/A 12.477±0.00 N/A N/A 2.110±0.00 7.047±2.58 0.379±0.00
ENST00000515796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253406 ENST00000523176 N/A N/A 0.381±0.00 N/A 0.434±0.00 0.145±0.00 N/A N/A N/A N/A N/A 0.259±0.00 N/A N/A

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