C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001N6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000162601-ENSG00000177606 CGP 9606 1:58654739-58784327
GeneTranscriptPositionBiotype
ENSG00000162601 (MYSM1)
Myb-like, SWIRM and MPN domains 1 		ENST00000401044 (MYSM1-002) 58659153-58690394 processed_transcript
ENST00000466774 (MYSM1-005) 58682409-58700080 processed_transcript
ENST00000472487 (MYSM1-001) 58654739-58700092 protein_coding
ENST00000481973 (MYSM1-007) 58676772-58681896 processed_transcript
ENST00000483003 (MYSM1-006) 58690188-58700072 processed_transcript
ENST00000489282 (MYSM1-004) 58692406-58700077 processed_transcript
ENST00000493821 (MYSM1-003) 58654740-58689662 processed_transcript
ENST00000622766 (MYSM1-201) 58654751-58668483 protein_coding
ENSG00000177606 (JUN)
jun proto-oncogene 		ENST00000371222 (JUN-001) 58780788-58784327 protein_coding
ENSG00000264081 (AL136985.1)
 ENST00000582637 (AL136985.1-201) 58764849-58764935 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0001N6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000062627-ENSMUSG00000052684 CGP 10090 4:94942040-95052222
GeneTranscriptPositionBiotype
ENSMUSG00000052684 (Jun)
jun proto-oncogene 		ENSMUST00000107094 (Jun-001) 95049034-95052222 protein_coding
ENSMUSG00000052767 (Gm12703)
predicted gene 12703 		ENSMUST00000145411 (Gm12703-001) 95029963-95048370 processed_transcript
ENSMUSG00000062627 (Mysm1)
myb-like, SWIRM and MPN domains 1 		ENSMUST00000075872 (Mysm1-001) 94942040-94979100 protein_coding
ENSMUST00000124820 (Mysm1-003) 94942063-94953388 processed_transcript
ENSMUST00000125427 (Mysm1-004) 94947025-94953518 processed_transcript
ENSMUST00000131575 (Mysm1-006) 94970279-94979053 processed_transcript
ENSMUST00000132758 (Mysm1-008) 94965735-94979078 processed_transcript
ENSMUST00000134730 (Mysm1-007) 94965603-94979042 processed_transcript
ENSMUST00000136130 (Mysm1-005) 94972433-94979075 processed_transcript
ENSMUST00000149954 (Mysm1-002) 94964376-94979075 processed_transcript
ENSMUST00000155935 (Mysm1-009) 94965643-94970651 processed_transcript
ENSMUSG00000081030 (Gm12704)
predicted gene 12704 		ENSMUST00000119789 (Gm12704-001) 95039162-95039625 processed_pseudogene
ENSMUSG00000086251 (Gm12694)
predicted gene 12694 		ENSMUST00000149367 (Gm12694-001) 94979203-95028544 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001N6_0001ENSG00000162601ENST00000401044ENST00000466774ENST00000472487ENST00000481973ENST00000483003ENST00000489282ENST00000493821ENST00000622766ENSG00000177606ENST00000371222ENSG00000264081ENST00000582637CIL_0001N6_0002ENSMUSG00000052684ENSMUST00000107094ENSMUSG00000052767ENSMUST00000145411ENSMUSG00000062627ENSMUST00000075872ENSMUST00000124820ENSMUST00000125427ENSMUST00000131575ENSMUST00000132758ENSMUST00000134730ENSMUST00000136130ENSMUST00000149954ENSMUST00000155935ENSMUSG00000081030ENSMUST00000119789ENSMUSG00000086251ENSMUST00000149367
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001N6_0001ENSG00000162601ENST00000401044ENST00000472487ENST00000493821ENST00000622766ENSG00000177606ENST00000371222ENSG00000264081ENST00000582637CIL_0001N6_0002ENSMUSG00000052684ENSMUST00000107094ENSMUSG00000052767ENSMUST00000145411ENSMUSG00000062627ENSMUST00000075872ENSMUST00000124820ENSMUST00000125427ENSMUST00000155935ENSMUSG00000081030ENSMUST00000119789ENSMUSG00000086251ENSMUST00000149367
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000162601 ENST00000401044 N/A N/A N/A 1.249±0.00 1.838±0.00 3.126±0.00 1.553±0.00 2.256±0.00 1.432±0.00 N/A N/A 2.797±0.00 N/A 1.174±0.00
ENST00000466774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472487 1.182±0.00 1.179±0.00 0.447±0.00 1.026±0.10 0.897±0.02 1.265±0.69 0.585±0.07 0.649±0.09 0.663±0.49 1.457±0.89 0.902±0.00 0.944±0.30 0.533±0.26 1.073±0.17
ENST00000481973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493821 N/A 0.657±0.00 0.532±0.00 0.632±0.06 N/A N/A 0.485±0.00 N/A N/A N/A N/A N/A N/A 0.453±0.00
ENST00000622766 0.382±0.00 1.175±0.00 N/A N/A 1.031±0.00 0.121±0.00 N/A 1.511±0.00 0.565±0.00 1.452±0.34 N/A 1.560±0.97 0.259±0.10 0.836±0.19
ENSG00000177606 ENST00000371222 118.747±0.00 62.984±0.00 13.580±0.00 18.934±11.91 69.932±46.12 44.641±30.23 14.834±4.85 16.760±14.78 15.284±10.05 75.834±44.64 30.330±2.93 127.890±140.80 75.248±15.18 37.210±10.42
ENSG00000264081 ENST00000582637 N/A 0.617±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000052684 ENSMUST00000107094 26.986±6.90 110.725±19.07 19.022±3.64 18.733±3.26 22.266±9.72 59.907±5.69 12.175±2.77 9.454±0.79 2.875±1.37 114.134±25.29 18.366±2.78 58.493±18.06 25.887±8.21 2.696±0.50
ENSMUSG00000052767 ENSMUST00000145411 N/A N/A 0.004±0.00 N/A N/A N/A N/A N/A 0.003±0.00 N/A N/A 0.011±0.00 N/A 0.030±0.02
ENSMUSG00000062627 ENSMUST00000075872 0.923±0.08 0.390±0.00 1.765±0.29 2.121±0.29 0.695±0.07 0.577±0.19 0.443±0.07 0.944±0.21 1.260±0.45 0.956±0.00 0.697±0.22 1.337±0.83 2.551±0.62 0.472±0.08
ENSMUST00000124820 2.571±0.62 1.981±0.53 4.259±0.93 4.959±0.92 2.793±0.48 1.911±0.51 0.517±0.21 1.212±0.21 1.294±0.69 3.542±0.27 0.390±0.11 2.992±1.08 1.642±0.05 0.707±0.24
ENSMUST00000125427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.939±0.00 N/A N/A
ENSMUST00000131575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155935 N/A N/A N/A 13.563±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 12.157±1.36 6.903±0.00
ENSMUSG00000081030 ENSMUST00000119789 0.112±0.00 N/A N/A 0.057±0.00 N/A N/A N/A N/A 0.050±0.01 N/A N/A 0.197±0.01 0.149±0.05 N/A
ENSMUSG00000086251 ENSMUST00000149367 N/A N/A N/A 0.036±0.02 N/A N/A N/A N/A N/A N/A N/A 0.192±0.15 N/A 0.325±0.21

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