C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001OT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000011466-ENSDARG00000023058 CGP 7955 17:6529455-6574619
GeneTranscriptPositionBiotype
ENSDARG00000011466 (lace1a)
lactation elevated 1a 		ENSDART00000007622 (lace1a-002) 6529481-6553370 protein_coding
ENSDART00000156637 (lace1a-001) 6529455-6553504 protein_coding
ENSDARG00000023058 (foxo3a)
forkhead box O3A 		ENSDART00000030773 (foxo3a-001) 6556835-6574619 protein_coding
CIL_0001OT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135537-ENSG00000118689 CGP 9606 6:108294894-108684774
GeneTranscriptPositionBiotype
ENSG00000118689 (FOXO3)
forkhead box O3 		ENST00000343882 (FOXO3-001) 108559835-108684774 protein_coding
ENST00000406360 (FOXO3-201) 108560866-108684768 protein_coding
ENST00000540898 (FOXO3-202) 108656346-108680751 protein_coding
ENSG00000135537 (LACE1)
lactation elevated 1 		ENST00000368977 (LACE1-001) 108294894-108526001 protein_coding
ENST00000421954 (LACE1-006) 108295201-108523117 protein_coding
ENST00000430458 (LACE1-004) 108294991-108346990 processed_transcript
ENST00000431865 (LACE1-002) 108356690-108522334 nonsense_mediated_decay
ENST00000437715 (LACE1-007) 108295753-108356751 protein_coding
ENST00000481842 (LACE1-005) 108523137-108526796 processed_transcript
ENST00000486863 (LACE1-003) 108476979-108522465 retained_intron
ENSG00000227072 (RP3-466I7.1)
 ENST00000436728 (RP3-466I7.1-001) 108387512-108388080 processed_pseudogene
ENSG00000228976 (SUMO2P8)
SUMO2 pseudogene 8 		ENST00000434672 (SUMO2P8-001) 108618000-108618285 processed_pseudogene
ENSG00000238055 (RP1-128O3.6)
 ENST00000418637 (RP1-128O3.6-001) 108318079-108318404 processed_pseudogene
ENSG00000238079 (RP11-72I2.1)
 ENST00000442911 (RP11-72I2.1-001) 108372772-108372927 processed_pseudogene
ENSG00000271608 (RP11-697G4.4)
 ENST00000603860 (RP11-697G4.4-001) 108551018-108551207 processed_pseudogene
ENSG00000279498 (RP11-72I2.2)
 ENST00000624715 (RP11-72I2.2-001) 108359084-108359863 TEC

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001OT_0001ENSDARG00000011466ENSDART00000007622ENSDART00000156637ENSDARG00000023058ENSDART00000030773CIL_0001OT_0002ENSG00000118689ENST00000343882ENST00000406360ENST00000540898ENSG00000135537ENST00000368977ENST00000421954ENST00000430458ENST00000431865ENST00000437715ENST00000481842ENST00000486863ENSG00000227072ENST00000436728ENSG00000228976ENST00000434672ENSG00000238055ENST00000418637ENSG00000238079ENST00000442911ENSG00000271608ENST00000603860ENSG00000279498ENST00000624715
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001OT_0001ENSDARG00000011466ENSDART00000007622ENSDART00000156637ENSDARG00000023058ENSDART00000030773CIL_0001OT_0002ENSG00000118689ENST00000343882ENST00000406360ENSG00000135537ENST00000368977ENST00000421954ENST00000430458ENST00000431865ENST00000437715ENST00000486863ENSG00000227072ENST00000436728ENSG00000228976ENST00000434672ENSG00000238055ENST00000418637ENSG00000238079ENST00000442911ENSG00000271608ENST00000603860ENSG00000279498ENST00000624715
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000011466 ENSDART00000007622 N/A N/A N/A 2.832±1.86 N/A N/A 1.139±0.00 1.115±0.55 1.043±0.00 N/A 1.673±0.00 N/A N/A N/A
ENSDART00000156637 N/A N/A N/A 2.972±1.68 N/A N/A 4.608±0.56 2.686±1.51 N/A N/A 0.235±0.00 N/A N/A N/A
ENSDARG00000023058 ENSDART00000030773 N/A N/A N/A 38.851±7.82 N/A N/A 4.088±4.78 1.665±0.54 0.104±0.00 N/A 1.391±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000118689 ENST00000343882 12.795±0.00 N/A 1.866±0.00 9.585±4.92 7.668±2.91 2.963±2.31 5.964±4.79 5.795±3.51 3.598±0.69 11.118±6.06 14.902±8.56 5.492±2.47 2.081±0.79 6.016±3.94
ENST00000406360 3.813±0.00 N/A N/A N/A N/A 2.483±0.00 2.611±0.00 N/A 2.478±0.00 2.712±0.31 7.316±0.00 3.857±1.63 2.028±0.09 N/A
ENST00000540898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000135537 ENST00000368977 0.148±0.00 0.206±0.00 N/A 0.839±0.59 0.604±0.00 0.235±0.00 0.370±0.08 0.466±0.00 0.130±0.00 N/A 0.038±0.00 0.287±0.11 0.234±0.08 0.407±0.00
ENST00000421954 N/A 0.144±0.00 0.475±0.00 N/A 0.337±0.00 0.702±0.00 0.592±0.00 N/A N/A 0.491±0.00 0.146±0.01 0.856±0.30 0.440±0.13 6.055±4.22
ENST00000430458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.902±0.00 3.088±0.00 1.646±0.00 N/A
ENST00000431865 0.996±0.00 0.738±0.00 N/A N/A 1.663±0.00 1.350±0.00 0.650±0.00 1.877±0.00 1.514±0.00 N/A 0.765±0.00 1.536±0.69 1.592±0.00 16.552±9.28
ENST00000437715 0.458±0.00 N/A N/A N/A N/A N/A 1.185±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000481842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486863 N/A 0.120±0.00 0.120±0.00 N/A N/A N/A N/A 0.213±0.00 0.230±0.00 N/A 0.162±0.00 N/A N/A N/A
ENSG00000227072 ENST00000436728 N/A N/A N/A N/A N/A N/A N/A 0.210±0.00 0.396±0.00 N/A N/A 0.046±0.00 N/A 0.228±0.11
ENSG00000228976 ENST00000434672 N/A 0.136±0.00 3.513±0.00 0.120±0.07 0.044±0.00 0.372±0.00 0.333±0.00 0.313±0.00 0.040±0.00 0.042±0.00 N/A 5.758±0.00 N/A 0.173±0.01
ENSG00000238055 ENST00000418637 N/A 0.498±0.00 N/A 0.208±0.02 1.755±1.30 0.903±0.00 0.368±0.25 N/A 0.041±0.00 0.044±0.00 N/A 0.659±0.13 0.077±0.00 0.458±0.00
ENSG00000238079 ENST00000442911 N/A N/A N/A 0.385±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000271608 ENST00000603860 N/A N/A N/A N/A N/A N/A N/A 0.375±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000279498 ENST00000624715 N/A 0.016±0.00 N/A N/A 0.384±0.00 N/A 0.046±0.00 N/A 0.441±0.00 N/A N/A 0.078±0.00 N/A N/A

Loading