C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUB1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000502453 SUB1-005 ENSG00000113387 9606 + 5:32594923-32601130 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLungENST00000502453
Transcript ID Bladder Lung
ENST00000502453 0.895±0.00 1.474±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002SE CIL_0002SE_0002 CGP 5:32354350-32604079
CIL_000211 CIL_000211_0002 CGP 5:32531633-32791724

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110504 Sub1-002 protein_coding Mus_musculus 0 261
ENSMUST00000022816 Sub1-001 protein_coding Mus_musculus 0 261
ENSMUST00000121603 Gm2986-001 processed_pseudogene Mus_musculus 0 193
ENSMUST00000134414 Sub1-003 processed_transcript Mus_musculus 2e-30 139
ENSMUST00000129533 Sub1-004 retained_intron Mus_musculus 2e-30 139
ENSMUST00000146827 Nrf1-011 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000115199 Nrf1-010 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000148990 Nrf1-009 processed_transcript Mus_musculus 0.00000000002 77
ENSMUST00000115204 Nrf1-007 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000115200 Nrf1-015 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000133928 Nrf1-016 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000115206 Nrf1-004 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000146988 Nrf1-003 retained_intron Mus_musculus 0.00000000002 77
ENSMUST00000115211 Nrf1-002 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000123194 Nrf1-008 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000115212 Nrf1-001 protein_coding Mus_musculus 0.00000000002 77

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