C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUB1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000504789 SUB1-008 ENSG00000113387 9606 + 5:32585887-32601257 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000504789
Transcript ID Adipose Adrenal Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000504789 25.157±0.00 32.270±0.00 36.639±0.00 34.515±0.00 51.553±0.00 30.678±0.00 55.803±0.00 16.226±0.00 79.987±8.45 42.355±9.19 42.204±10.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002SE CIL_0002SE_0002 CGP 5:32354350-32604079
CIL_000211 CIL_000211_0002 CGP 5:32531633-32791724

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110504 Sub1-002 protein_coding Mus_musculus 0 486
ENSMUST00000022816 Sub1-001 protein_coding Mus_musculus 0 486
ENSMUST00000121603 Gm2986-001 processed_pseudogene Mus_musculus 0 302
ENSMUST00000134414 Sub1-003 processed_transcript Mus_musculus 0 259
ENSMUST00000129533 Sub1-004 retained_intron Mus_musculus 0 259

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