C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00024O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000025576-ENSDARG00000031228 CGP 7955 4:10755447-10815561
GeneTranscriptPositionBiotype
ENSDARG00000031228 (podxl)
podocalyxin-like 		ENSDART00000102301 (podxl-001) 10796680-10815561 protein_coding
ENSDART00000150299 (podxl-002) 10798886-10802463 protein_coding
CIL_00024O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000128585-ENSG00000128567 CGP 9606 7:131110096-131558217
GeneTranscriptPositionBiotype
ENSG00000128567 (PODXL)
podocalyxin-like 		ENST00000322985 (PODXL-001) 131504131-131556609 protein_coding
ENST00000378555 (PODXL-005) 131504131-131556607 protein_coding
ENST00000446198 (PODXL-003) 131500262-131556563 nonsense_mediated_decay
ENST00000465001 (PODXL-010) 131511195-131558217 processed_transcript
ENST00000482581 (PODXL-006) 131509069-131510898 retained_intron
ENST00000484346 (PODXL-009) 131503950-131506105 retained_intron
ENST00000487965 (PODXL-007) 131505889-131509402 retained_intron
ENST00000490761 (PODXL-008) 131505876-131506927 retained_intron
ENSG00000128585 (MKLN1)
muskelin 1, intracellular mediator containing kelch motifs 		ENST00000352689 (MKLN1-001) 131327860-131496636 protein_coding
ENST00000416992 (MKLN1-013) 131110140-131399384 protein_coding
ENST00000421797 (MKLN1-012) 131110096-131487844 protein_coding
ENST00000429546 (MKLN1-014) 131285062-131399357 protein_coding
ENST00000446815 (MKLN1-007) 131327846-131399297 protein_coding
ENST00000458153 (MKLN1-003) 131327897-131487962 nonsense_mediated_decay
ENST00000468830 (MKLN1-011) 131478471-131487962 retained_intron
ENST00000494286 (MKLN1-008) 131327856-131414703 processed_transcript
ENST00000494785 (MKLN1-002) 131327883-131478960 retained_intron
ENST00000496815 (MKLN1-009) 131470838-131472267 processed_transcript
ENST00000497746 (MKLN1-010) 131463325-131471178 retained_intron
ENST00000498778 (MKLN1-006) 131463276-131490539 processed_transcript
ENSG00000224545 (AC008264.4)
 ENST00000447612 (AC008264.4-001) 131520137-131520503 processed_pseudogene
ENSG00000233287 (AC009362.2)
 ENST00000427253 (AC009362.2-001) 131242590-131242995 processed_pseudogene
ENSG00000273489 (RP11-180C16.1)
 ENST00000610193 (RP11-180C16.1-001) 131493964-131497694 antisense
CIL_00024O_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025609-ENSMUSG00000025608 CGP 10090 6:31398735-31563981
GeneTranscriptPositionBiotype
ENSMUSG00000025608 (Podxl)
podocalyxin-like 		ENSMUST00000026698 (Podxl-001) 31519488-31563981 protein_coding
ENSMUST00000136877 (Podxl-002) 31522992-31524311 processed_transcript
ENSMUSG00000025609 (Mkln1)
muskelin 1, intracellular mediator containing kelch motifs 		ENSMUST00000026699 (Mkln1-001) 31398735-31516811 protein_coding
ENSMUST00000130108 (Mkln1-003) 31489394-31512028 protein_coding
ENSMUST00000133182 (Mkln1-008) 31398836-31419436 retained_intron
ENSMUST00000134315 (Mkln1-004) 31398828-31470889 retained_intron
ENSMUST00000134544 (Mkln1-006) 31398845-31444150 retained_intron
ENSMUST00000137621 (Mkln1-007) 31398829-31436017 retained_intron
ENSMUST00000141045 (Mkln1-011) 31468120-31492693 processed_transcript
ENSMUST00000142469 (Mkln1-002) 31496766-31507965 processed_transcript
ENSMUST00000147614 (Mkln1-009) 31430716-31474376 processed_transcript
ENSMUST00000149859 (Mkln1-012) 31492621-31507847 processed_transcript
ENSMUST00000150949 (Mkln1-005) 31430682-31489411 processed_transcript
ENSMUST00000154954 (Mkln1-010) 31398859-31433131 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00024O_0001ENSDARG00000031228ENSDART00000102301ENSDART00000150299CIL_00024O_0002ENSG00000128567ENST00000322985ENST00000378555ENST00000446198ENST00000465001ENST00000482581ENST00000484346ENST00000487965ENST00000490761ENSG00000128585ENST00000352689ENST00000416992ENST00000421797ENST00000429546ENST00000446815ENST00000458153ENST00000468830ENST00000494286ENST00000494785ENST00000496815ENST00000497746ENST00000498778ENSG00000224545ENST00000447612ENSG00000233287ENST00000427253ENSG00000273489ENST00000610193CIL_00024O_0003ENSMUSG00000025608ENSMUST00000026698ENSMUST00000136877ENSMUSG00000025609ENSMUST00000026699ENSMUST00000130108ENSMUST00000133182ENSMUST00000134315ENSMUST00000134544ENSMUST00000137621ENSMUST00000141045ENSMUST00000142469ENSMUST00000147614ENSMUST00000149859ENSMUST00000150949ENSMUST00000154954
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00024O_0001ENSDARG00000031228ENSDART00000102301ENSDART00000150299CIL_00024O_0002ENSG00000128567ENST00000322985ENST00000378555ENST00000446198ENST00000484346ENSG00000128585ENST00000352689ENST00000421797ENST00000458153ENST00000494785ENST00000498778ENSG00000224545ENST00000447612ENSG00000233287ENST00000427253ENSG00000273489ENST00000610193CIL_00024O_0003ENSMUSG00000025608ENSMUST00000026698ENSMUSG00000025609ENSMUST00000026699ENSMUST00000130108ENSMUST00000133182ENSMUST00000134544ENSMUST00000137621ENSMUST00000141045ENSMUST00000142469ENSMUST00000149859ENSMUST00000150949ENSMUST00000154954
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000031228 ENSDART00000102301 N/A N/A N/A 9.528±6.44 N/A N/A 60.942±34.16 18.722±2.13 0.926±0.00 N/A 13.220±0.00 N/A N/A N/A
ENSDART00000150299 N/A N/A N/A N/A N/A N/A N/A N/A 0.821±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000128567 ENST00000322985 N/A N/A N/A N/A N/A N/A N/A N/A 0.998±0.00 N/A N/A N/A N/A N/A
ENST00000378555 N/A N/A 9.488±0.00 N/A N/A N/A N/A 0.582±0.00 N/A N/A N/A N/A N/A N/A
ENST00000446198 N/A N/A 5.915±0.00 N/A N/A N/A 2.908±0.00 N/A 0.741±0.00 2.788±0.00 N/A 1.741±0.82 N/A N/A
ENST00000465001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484346 N/A N/A N/A N/A N/A N/A N/A 0.954±0.00 N/A N/A N/A N/A N/A N/A
ENST00000487965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000128585 ENST00000352689 N/A 2.065±0.00 N/A N/A 3.344±0.00 N/A 0.579±0.00 2.374±0.00 N/A 5.042±0.00 1.343±0.14 3.531±1.26 1.155±0.00 N/A
ENST00000416992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421797 N/A N/A N/A N/A N/A N/A 2.443±0.00 N/A N/A N/A N/A 2.991±0.00 N/A N/A
ENST00000429546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458153 N/A N/A 6.652±0.00 N/A N/A N/A 4.715±0.00 6.593±0.00 2.330±0.00 4.111±0.00 7.900±0.00 4.380±0.00 4.218±0.29 9.285±2.01
ENST00000468830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494785 N/A N/A N/A 5.515±0.00 7.184±0.00 N/A N/A N/A 12.325±0.00 10.337±0.00 3.239±0.00 10.488±0.00 N/A N/A
ENST00000496815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498778 N/A N/A N/A N/A 5.835±0.00 N/A 2.499±0.00 4.739±0.00 N/A 6.184±0.00 N/A 7.558±0.00 N/A N/A
ENSG00000224545 ENST00000447612 N/A 0.207±0.00 N/A N/A 0.100±0.00 0.046±0.00 0.264±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000233287 ENST00000427253 0.146±0.00 0.077±0.00 N/A 0.290±0.21 0.117±0.00 0.179±0.00 0.137±0.00 0.345±0.00 0.034±0.00 0.073±0.00 0.033±0.00 N/A N/A 0.061±0.03
ENSG00000273489 ENST00000610193 7.948±0.00 6.950±0.00 5.307±0.00 6.693±2.40 5.723±1.28 5.157±0.82 2.820±1.24 6.063±3.55 4.493±0.66 4.971±0.84 2.999±1.41 6.683±0.91 3.116±0.72 7.337±0.76
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025608 ENSMUST00000026698 21.792±2.88 25.087±15.14 11.531±0.99 5.985±1.51 19.694±10.25 12.718±3.04 20.239±2.17 67.030±3.74 3.778±3.16 79.037±42.93 6.926±1.90 26.614±8.24 42.581±15.88 0.914±0.35
ENSMUST00000136877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025609 ENSMUST00000026699 3.035±0.85 1.600±0.29 4.778±0.26 7.371±0.93 2.866±0.21 1.598±0.42 1.965±0.14 3.290±0.31 2.177±0.70 4.486±0.36 3.740±0.68 2.409±0.47 1.921±1.15 1.290±0.57
ENSMUST00000130108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.662±1.00 1.656±0.00 N/A
ENSMUST00000133182 N/A 89.253±19.22 N/A N/A N/A 17.416±2.81 N/A N/A 37.200±10.92 N/A N/A 21.256±0.29 N/A N/A
ENSMUST00000134315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.276±0.51 N/A N/A
ENSMUST00000137621 N/A N/A N/A N/A N/A 4.607±0.49 N/A N/A N/A N/A N/A 6.356±2.00 N/A N/A
ENSMUST00000141045 N/A N/A N/A 29.231±0.00 N/A N/A N/A N/A N/A N/A N/A 40.183±7.23 37.549±14.23 11.603±0.00
ENSMUST00000142469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 50.849±0.00
ENSMUST00000147614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149859 N/A N/A N/A N/A 32.720±0.00 N/A N/A N/A N/A N/A N/A 35.227±0.00 38.323±7.89 20.965±0.00
ENSMUST00000150949 11.458±0.61 N/A 15.476±2.16 24.051±0.00 12.402±3.92 5.353±0.54 11.055±1.78 13.307±1.28 10.744±5.27 14.689±0.00 17.131±1.16 15.509±10.15 22.638±6.59 12.484±2.19
ENSMUST00000154954 26.823±7.71 26.635±2.98 N/A N/A 35.168±6.57 19.242±3.22 21.614±0.82 37.283±4.50 25.876±2.08 40.389±4.31 N/A 20.936±2.42 25.112±5.13 17.927±0.00

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