C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000269_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000162434-ENSG00000162433 CGP 9606 1:64833229-65232145
GeneTranscriptPositionBiotype
ENSG00000162433 (AK4)
adenylate kinase 4 		ENST00000327299 (AK4-001) 65148203-65232136 protein_coding
ENST00000395334 (AK4-201) 65147830-65232145 protein_coding
ENST00000470888 (AK4-003) 65147669-65224837 processed_transcript
ENST00000474968 (AK4-004) 65149002-65226439 processed_transcript
ENST00000479060 (AK4-005) 65165932-65226429 processed_transcript
ENST00000497030 (AK4-002) 65147549-65226092 processed_transcript
ENST00000545314 (AK4-202) 65147549-65232145 protein_coding
ENST00000546702 (AK4-007) 65147670-65226891 protein_coding
ENSG00000162434 (JAK1)
Janus kinase 1 		ENST00000342505 (JAK1-001) 64833229-64966504 protein_coding
ENST00000465376 (JAK1-006) 64841474-64848107 processed_transcript
ENST00000467764 (JAK1-003) 64875985-64879063 processed_transcript
ENST00000471473 (JAK1-005) 64844096-64846909 processed_transcript
ENST00000481702 (JAK1-002) 64839496-64841258 processed_transcript
ENST00000494904 (JAK1-004) 64859642-64864856 processed_transcript
ENSG00000185031 (SLC2A3P2)
solute carrier family 2 (facilitated glucose transporter), member 3 pseudogene 2 		ENST00000331747 (SLC2A3P2-001) 64984608-64986087 processed_pseudogene
ENSG00000212257 (RNU6-1176P)
RNA, U6 small nuclear 1176, pseudogene 		ENST00000390955 (RNU6-1176P-201) 65022968-65023074 snRNA
ENSG00000226891 (LINC01359)
long intergenic non-protein coding RNA 1359 		ENST00000415842 (LINC01359-002) 64979577-65002476 lincRNA
ENST00000436350 (LINC01359-004) 64993003-65002437 lincRNA
ENST00000444349 (LINC01359-003) 64979577-64991404 lincRNA
ENST00000447748 (LINC01359-001) 64972225-64993012 lincRNA
ENSG00000231485 (RP4-535B20.1)
 ENST00000448344 (RP4-535B20.1-001) 65066627-65067737 lincRNA
ENSG00000233877 (RP11-182I10.2)
 ENST00000446914 (RP11-182I10.2-001) 64941979-64942365 processed_pseudogene
ENSG00000234496 (MRPS21P1)
mitochondrial ribosomal protein S21 pseudogene 1 		ENST00000453850 (MRPS21P1-001) 65092392-65092614 processed_pseudogene
ENSG00000234784 (RP11-182I10.1)
 ENST00000442855 (RP11-182I10.1-001) 64918443-64918683 processed_pseudogene
ENSG00000235804 (RP4-535B20.2)
 ENST00000416486 (RP4-535B20.2-001) 65077413-65078131 processed_pseudogene
ENSG00000265996 (MIR3671)
microRNA 3671 		ENST00000580455 (MIR3671-201) 65057755-65057842 miRNA
ENSG00000272506 (RP4-535B20.4)
 ENST00000607528 (RP4-535B20.4-001) 65003470-65004087 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_000269_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028530-ENSMUSG00000028527 CGP 10090 4:101152367-101466995
GeneTranscriptPositionBiotype
ENSMUSG00000028527 (Ak4)
adenylate kinase 4 		ENSMUST00000102780 (Ak4-001) 101419277-101466995 protein_coding
ENSMUST00000106945 (Ak4-007) 101419319-101466995 protein_coding
ENSMUST00000106946 (Ak4-003) 101419289-101466995 protein_coding
ENSMUST00000131397 (Ak4-002) 101419706-101460581 protein_coding
ENSMUST00000133055 (Ak4-004) 101419733-101463000 protein_coding
ENSMUST00000151561 (Ak4-005) 101420497-101463680 processed_transcript
ENSMUST00000155749 (Ak4-006) 101447223-101463779 protein_coding
ENSMUSG00000028530 (Jak1)
Janus kinase 1 		ENSMUST00000102781 (Jak1-001) 101152367-101265282 protein_coding
ENSMUST00000125968 (Jak1-004) 101197838-101265226 processed_transcript
ENSMUST00000132292 (Jak1-005) 101181912-101265223 processed_transcript
ENSMUST00000136167 (Jak1-003) 101179591-101185425 processed_transcript
ENSMUST00000147211 (Jak1-002) 101181019-101185450 processed_transcript
ENSMUST00000149297 (Jak1-006) 101191626-101265273 protein_coding
ENSMUST00000151235 (Jak1-008) 101154249-101155119 processed_transcript
ENSMUST00000155328 (Jak1-007) 101181872-101265281 processed_transcript
ENSMUSG00000035275 (Raver2)
ribonucleoprotein, PTB-binding 2 		ENSMUST00000038463 (Raver2-001) 101068983-101152370 protein_coding
ENSMUST00000106955 (Raver2-002) 101068983-101135356 protein_coding
ENSMUST00000148148 (Raver2-003) 101069479-101103806 processed_transcript
ENSMUSG00000077677 (Gm24468)
predicted gene, 24468 		ENSMUST00000104489 (Gm24468-201) 101186764-101186867 snRNA
ENSMUSG00000081621 (Gm12793)
predicted gene 12793 		ENSMUST00000119268 (Gm12793-001) 101341357-101341648 processed_pseudogene
ENSMUSG00000082928 (Gm12785)
predicted gene 12785 		ENSMUST00000122052 (Gm12785-001) 101210416-101210587 processed_pseudogene
ENSMUSG00000083614 (Gm12795)
predicted gene 12795 		ENSMUST00000117594 (Gm12795-001) 101362177-101362890 processed_pseudogene
ENSMUSG00000084758 (Gm12798)
predicted gene 12798 		ENSMUST00000124786 (Gm12798-001) 101403081-101407856 lincRNA
ENSMUSG00000085721 (Gm12796)
predicted gene 12796 		ENSMUST00000131864 (Gm12796-001) 101292414-101321745 lincRNA
ENSMUSG00000086782 (E130102H24Rik)
RIKEN cDNA E130102H24 gene 		ENSMUST00000144604 (E130102H24Rik-001) 101346531-101356248 lincRNA
ENSMUST00000189920 (E130102H24Rik-002) 101356042-101356735 lincRNA
ENSMUSG00000087361 (0610043K17Rik)
RIKEN cDNA 0610043K17 gene 		ENSMUST00000123107 (0610043K17Rik-001) 101353783-101399181 lincRNA
ENSMUST00000142581 (0610043K17Rik-002) 101366651-101391073 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000269_0001ENSG00000162433ENST00000327299ENST00000395334ENST00000479060ENST00000545314ENSG00000162434ENST00000342505ENSG00000185031ENST00000331747ENSG00000212257ENST00000390955ENSG00000226891ENST00000415842ENST00000436350ENST00000444349ENST00000447748ENSG00000231485ENST00000448344ENSG00000233877ENST00000446914ENSG00000234496ENST00000453850ENSG00000234784ENST00000442855ENSG00000235804ENST00000416486ENSG00000265996ENST00000580455ENSG00000272506ENST00000607528CIL_000269_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000162433 ENST00000327299 2.755±0.00 2.010±0.00 18.354±0.00 2.073±0.27 4.981±0.00 4.677±0.00 5.760±0.95 11.787±5.71 4.969±2.17 1.176±0.00 N/A 0.882±0.43 0.717±0.36 4.142±0.68
ENST00000395334 1.063±0.00 0.587±0.00 N/A 1.090±0.46 3.416±0.00 N/A 3.842±0.00 3.959±1.24 1.534±0.00 N/A N/A 1.655±0.00 N/A 1.069±0.00
ENST00000470888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479060 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.438±0.00 N/A N/A N/A N/A
ENST00000497030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545314 2.126±0.00 0.999±0.00 N/A 1.945±0.00 2.507±1.84 3.182±0.00 3.310±0.00 8.824±0.00 N/A N/A N/A 1.199±0.66 0.219±0.00 1.486±0.00
ENST00000546702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000162434 ENST00000342505 49.588±0.00 26.708±0.00 5.700±0.00 10.164±3.11 19.008±8.78 16.207±9.65 16.615±9.03 19.308±4.81 13.320±6.29 34.351±8.89 19.748±11.79 17.262±8.01 21.246±1.53 27.142±3.22
ENST00000465376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185031 ENST00000331747 0.065±0.00 0.056±0.00 1.330±0.00 0.460±0.43 0.492±0.39 0.713±0.64 0.402±0.38 N/A 1.621±0.00 1.919±0.00 0.894±0.00 0.612±0.64 N/A 0.070±0.05
ENSG00000212257 ENST00000390955 N/A N/A N/A N/A N/A 0.756±0.00 0.467±0.00 N/A N/A N/A N/A 0.413±0.00 N/A 0.780±0.00
ENSG00000226891 ENST00000415842 0.117±0.00 N/A N/A 0.173±0.00 N/A N/A 0.204±0.00 N/A N/A N/A N/A N/A 0.092±0.00 0.309±0.00
ENST00000436350 N/A N/A N/A N/A N/A 0.259±0.00 N/A 0.101±0.04 N/A N/A N/A 0.067±0.00 0.071±0.00 1.041±0.00
ENST00000444349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.517±0.00
ENST00000447748 N/A 0.492±0.00 N/A 0.379±0.00 0.287±0.00 0.173±0.10 0.081±0.00 0.121±0.00 0.094±0.00 0.148±0.00 0.036±0.00 0.182±0.05 0.016±0.00 0.158±0.00
ENSG00000231485 ENST00000448344 1.619±0.00 0.138±0.00 0.969±0.00 2.703±0.00 0.626±0.00 0.282±0.00 0.474±0.00 N/A 0.158±0.00 0.588±0.11 0.142±0.00 2.763±1.61 0.077±0.00 0.309±0.23
ENSG00000233877 ENST00000446914 N/A 0.075±0.00 0.443±0.00 N/A 0.109±0.06 N/A 1.175±0.00 2.902±0.00 1.233±0.00 N/A 0.804±0.00 0.330±0.00 N/A N/A
ENSG00000234496 ENST00000453850 N/A 0.094±0.00 N/A N/A N/A 0.090±0.00 0.090±0.00 N/A N/A 0.101±0.00 N/A 3.829±0.00 N/A 0.084±0.00
ENSG00000234784 ENST00000442855 N/A 0.064±0.00 N/A 0.246±0.18 N/A N/A 0.233±0.00 N/A 1.808±1.75 4.488±0.00 N/A N/A N/A N/A
ENSG00000235804 ENST00000416486 N/A N/A N/A N/A 0.027±0.00 N/A 0.024±0.00 N/A 0.047±0.00 0.049±0.00 0.118±0.00 N/A N/A N/A
ENSG00000265996 ENST00000580455 N/A N/A N/A 0.206±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000272506 ENST00000607528 0.020±0.00 0.176±0.00 N/A 0.127±0.08 0.409±0.20 0.076±0.06 0.188±0.00 0.366±0.29 1.429±0.00 0.322±0.14 0.123±0.00 0.350±0.20 0.082±0.01 0.245±0.15
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028527 ENSMUST00000102780 0.285±0.15 0.312±0.10 2.822±0.39 1.621±0.14 0.491±0.11 0.833±0.37 6.382±2.13 26.366±6.79 5.386±2.28 0.366±0.00 0.232±0.06 0.846±0.35 4.755±3.67 0.524±0.16
ENSMUST00000106945 0.211±0.04 0.135±0.00 0.702±0.00 N/A 0.285±0.15 0.995±0.00 2.360±1.43 38.026±4.51 1.425±0.52 N/A 0.274±0.05 1.726±0.64 2.722±0.75 1.054±0.00
ENSMUST00000106946 0.504±0.03 0.542±0.14 1.041±0.27 0.631±0.34 0.256±0.15 0.625±0.32 N/A 10.210±0.03 2.815±1.49 0.469±0.22 0.639±0.00 1.153±0.50 1.316±0.00 0.773±0.01
ENSMUST00000131397 N/A 1.960±0.65 N/A N/A 0.869±0.00 1.575±0.15 N/A N/A N/A 0.725±0.00 N/A 3.697±0.54 N/A N/A
ENSMUST00000133055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.098±0.00 N/A N/A
ENSMUST00000151561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000028530 ENSMUST00000102781 41.451±9.65 27.307±2.82 20.853±0.97 16.116±2.14 44.730±8.15 24.934±2.06 19.151±0.61 26.355±0.78 15.858±2.77 38.412±1.20 26.560±5.00 58.481±7.81 21.076±7.14 7.273±0.40
ENSMUST00000125968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149297 N/A 38.821±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155328 N/A 23.564±3.89 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000035275 ENSMUST00000038463 5.341±0.01 N/A 7.581±0.02 3.680±0.05 N/A N/A N/A N/A N/A 14.085±2.23 N/A N/A N/A N/A
ENSMUST00000106955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000077677 ENSMUST00000104489 N/A N/A 156.096±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081621 ENSMUST00000119268 0.397±0.13 N/A 0.060±0.00 0.301±0.00 0.944±0.47 0.550±0.04 0.271±0.00 0.390±0.08 N/A 0.656±0.00 N/A 0.573±0.16 N/A 0.325±0.00
ENSMUSG00000082928 ENSMUST00000122052 N/A N/A N/A N/A N/A 67.638±46.90 N/A N/A 1.588±0.38 N/A N/A N/A 1.521±0.00 N/A
ENSMUSG00000083614 ENSMUST00000117594 0.155±0.03 N/A 0.270±0.01 0.588±0.00 0.434±0.14 N/A 0.085±0.00 N/A 0.081±0.05 0.341±0.00 0.070±0.02 0.462±0.18 0.090±0.02 N/A
ENSMUSG00000084758 ENSMUST00000124786 N/A N/A 0.286±0.15 1.307±1.09 0.202±0.07 0.182±0.02 0.156±0.09 0.199±0.09 0.116±0.05 0.268±0.13 0.135±0.06 0.433±0.10 0.619±0.54 0.460±0.37
ENSMUSG00000085721 ENSMUST00000131864 0.512±0.00 N/A N/A N/A 0.483±0.00 0.390±0.00 N/A N/A 0.252±0.00 N/A N/A 0.362±0.20 N/A N/A
ENSMUSG00000086782 ENSMUST00000144604 N/A 3.291±0.69 N/A N/A 2.577±0.08 1.422±0.22 N/A 6.368±0.64 2.541±0.75 3.834±0.00 N/A 4.002±1.10 0.656±0.00 1.094±0.67
ENSMUST00000189920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087361 ENSMUST00000123107 0.087±0.00 N/A 0.293±0.03 0.270±0.22 0.260±0.07 0.214±0.00 N/A 0.263±0.07 0.079±0.02 N/A 0.178±0.03 0.653±0.42 0.216±0.17 0.815±0.00
ENSMUST00000142581 0.178±0.00 0.331±0.00 0.227±0.00 0.009±0.00 0.875±0.00 N/A 0.161±0.01 0.389±0.00 0.331±0.22 N/A 0.488±0.36 N/A 0.481±0.53 0.159±0.00

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