C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12795
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117594 Gm12795-001 ENSMUSG00000083614 10090 - 4:101362177-101362890 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverLungMuscleOvaryPlacentaENSMUST00000117594
Transcript ID Adipose Bladder Brain Breast Heart Liver Lung Muscle Ovary Placenta
ENSMUST00000117594 0.155±0.03 0.270±0.01 0.588±0.00 0.434±0.14 0.085±0.00 0.081±0.05 0.341±0.00 0.070±0.02 0.462±0.18 0.090±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000269 CIL_000269_0002 CGP 4:101152367-101466995

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295955 RPL9-001 protein_coding Homo_sapiens 0 470
ENST00000330965 RPL9P7-001 processed_pseudogene Homo_sapiens 0 470
ENST00000393394 RPL9-201 protein_coding Homo_sapiens 0 475
ENST00000412915 RP4-799P18.5-001 processed_pseudogene Homo_sapiens 0 254
ENST00000418824 UBE2Q2P6-002 processed_transcript Homo_sapiens 1e-19 100
ENST00000420684 AC009500.2-001 processed_pseudogene Homo_sapiens 2.00386e-43 180
ENST00000423843 AC093698.1-001 processed_pseudogene Homo_sapiens 0 377
ENST00000424673 RPL9P2-001 processed_pseudogene Homo_sapiens 0 263
ENST00000449470 RPL9-002 protein_coding Homo_sapiens 0 470
ENST00000461606 RPL9P28-001 processed_pseudogene Homo_sapiens 0 409
ENST00000466501 UBE2Q2P6-001 transcribed_processed_pseudogene Homo_sapiens 0 475
ENST00000472460 RP11-851M3.1-001 processed_pseudogene Homo_sapiens 0 287
ENST00000489027 RP11-64K12.1-001 processed_pseudogene Homo_sapiens 0 326
ENST00000495117 RPL9P31-001 processed_pseudogene Homo_sapiens 0 268
ENST00000503040 RPL9-011 protein_coding Homo_sapiens 0 388
ENST00000503277 RPL9-008 retained_intron Homo_sapiens 0 438
ENST00000506581 RPL9-012 protein_coding Homo_sapiens 0 189
ENST00000508595 RPL9-007 protein_coding Homo_sapiens 0 438
ENST00000511643 RPL9-013 retained_intron Homo_sapiens 0 191
ENST00000514842 RPL9-005 retained_intron Homo_sapiens 0 322

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