C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002IQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000156675-ENSG00000169154 CGP 9606 8:37858618-37940129
GeneTranscriptPositionBiotype
ENSG00000156675 (RAB11FIP1)
RAB11 family interacting protein 1 (class I) 		ENST00000287263 (RAB11FIP1-001) 37858618-37899467 protein_coding
ENST00000330843 (RAB11FIP1-002) 37858949-37899454 protein_coding
ENST00000522727 (RAB11FIP1-008) 37862759-37899454 protein_coding
ENST00000522774 (RAB11FIP1-007) 37862895-37873278 retained_intron
ENST00000523182 (RAB11FIP1-003) 37862895-37873278 processed_transcript
ENST00000524118 (RAB11FIP1-006) 37870387-37878117 protein_coding
ENSG00000169154 (GOT1L1)
glutamic-oxaloacetic transaminase 1-like 1 		ENST00000307599 (GOT1L1-001) 37934281-37940129 protein_coding
ENST00000518826 (GOT1L1-003) 37934979-37936813 protein_coding
ENST00000524298 (GOT1L1-002) 37937638-37940103 protein_coding
ENSG00000241032 (RN7SL709P)
RNA, 7SL, cytoplasmic 709, pseudogene 		ENST00000478855 (RN7SL709P-201) 37908738-37909037 misc_RNA
ENSG00000280064 (RP11-205M5.3)
 ENST00000622942 (RP11-205M5.3-001) 37858949-37861333 TEC
CIL_0002IQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031488-ENSMUSG00000039720 CGP 10090 8:27138773-27202547
GeneTranscriptPositionBiotype
ENSMUSG00000031488 (Rab11fip1)
RAB11 family interacting protein 1 (class I) 		ENSMUST00000033878 (Rab11fip1-201) 27138773-27174646 protein_coding
ENSMUST00000054212 (Rab11fip1-202) 27138773-27174646 protein_coding
ENSMUSG00000039720 (Got1l1)
glutamic-oxaloacetic transaminase 1-like 1 		ENSMUST00000038174 (Got1l1-201) 27197460-27202547 protein_coding
ENSMUSG00000097262 (4933416M07Rik)
RIKEN cDNA 4933416M07 gene 		ENSMUST00000181424 (4933416M07Rik-201) 27142910-27149671 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002IQ_0001ENSG00000156675ENST00000287263ENST00000330843ENST00000522727ENST00000522774ENST00000523182ENST00000524118ENSG00000169154ENST00000307599ENST00000518826ENST00000524298ENSG00000241032ENST00000478855ENSG00000280064ENST00000622942CIL_0002IQ_0002ENSMUSG00000031488ENSMUST00000033878ENSMUST00000054212ENSMUSG00000039720ENSMUST00000038174ENSMUSG00000097262ENSMUST00000181424
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002IQ_0001ENSG00000156675ENST00000287263ENST00000330843ENST00000522727ENST00000522774ENSG00000169154ENST00000307599ENST00000518826ENST00000524298ENSG00000241032ENST00000478855ENSG00000280064ENST00000622942CIL_0002IQ_0002ENSMUSG00000031488ENSMUST00000033878ENSMUST00000054212ENSMUSG00000039720ENSMUST00000038174ENSMUSG00000097262ENSMUST00000181424
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000156675 ENST00000287263 0.599±0.00 N/A 1.204±0.00 0.107±0.00 N/A 1.452±0.00 0.472±0.00 0.509±0.00 0.392±0.20 N/A 0.196±0.00 4.000±2.51 2.979±2.07 1.168±0.00
ENST00000330843 0.782±0.00 2.378±0.00 N/A 0.147±0.04 1.251±0.26 1.909±0.94 0.719±0.52 1.164±0.80 1.008±0.00 N/A N/A 4.370±2.65 2.399±0.11 0.887±0.00
ENST00000522727 2.339±0.00 N/A N/A 0.838±0.00 1.935±0.00 9.256±0.00 1.132±0.00 N/A 2.076±1.15 N/A 1.072±0.00 8.396±4.67 5.932±0.12 N/A
ENST00000522774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.751±0.00 N/A N/A N/A
ENST00000523182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169154 ENST00000307599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.078±0.00 N/A 1.898±0.11
ENST00000518826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.073±0.69
ENST00000524298 0.058±0.00 N/A N/A 0.035±0.00 N/A 0.146±0.00 N/A N/A N/A N/A N/A 0.097±0.00 N/A N/A
ENSG00000241032 ENST00000478855 N/A N/A N/A N/A 0.131±0.00 N/A N/A N/A N/A N/A 0.055±0.00 1.448±0.00 N/A 0.149±0.00
ENSG00000280064 ENST00000622942 4.190±0.00 N/A 1.941±0.00 0.737±0.41 2.615±0.00 6.920±0.33 0.650±0.00 5.016±4.39 N/A 10.269±0.00 1.540±0.00 12.290±0.00 11.191±0.00 5.141±0.38
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031488 ENSMUST00000033878 0.612±0.47 1.636±0.39 3.908±0.11 0.147±0.04 1.256±0.54 11.824±1.28 0.166±0.06 2.307±0.33 0.854±0.34 11.539±0.72 0.029±0.02 2.056±0.95 2.175±1.03 1.419±0.61
ENSMUST00000054212 0.743±0.62 0.267±0.06 4.063±0.07 0.090±0.02 0.942±0.19 6.164±2.06 0.175±0.10 1.288±0.10 0.444±0.15 6.714±0.32 0.044±0.02 0.966±0.28 2.725±1.48 0.698±0.09
ENSMUSG00000039720 ENSMUST00000038174 0.269±0.14 N/A 0.083±0.01 0.184±0.05 0.127±0.03 0.057±0.00 0.067±0.03 0.040±0.02 0.018±0.02 0.279±0.07 N/A 0.264±0.12 0.649±0.22 23.869±3.68
ENSMUSG00000097262 ENSMUST00000181424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.227±1.67

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