C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002OU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000152990-ENSG00000109819 CGP 9606 4:22345071-23904089
GeneTranscriptPositionBiotype
ENSG00000109819 (PPARGC1A)
peroxisome proliferator-activated receptor gamma, coactivator 1 alpha 		ENST00000264867 (PPARGC1A-001) 23792021-23890077 protein_coding
ENST00000503714 (PPARGC1A-014) 23875782-23884931 processed_transcript
ENST00000505469 (PPARGC1A-009) 23877696-23882113 retained_intron
ENST00000506055 (PPARGC1A-007) 23795698-23890032 nonsense_mediated_decay
ENST00000507342 (PPARGC1A-003) 23831707-23899318 processed_transcript
ENST00000507380 (PPARGC1A-004) 23882679-23890035 protein_coding
ENST00000508380 (PPARGC1A-011) 23828562-23882111 processed_transcript
ENST00000509642 (PPARGC1A-005) 23814389-23882132 processed_transcript
ENST00000509702 (PPARGC1A-006) 23755041-23882111 processed_transcript
ENST00000512169 (PPARGC1A-012) 23831529-23882132 processed_transcript
ENST00000513205 (PPARGC1A-008) 23814333-23890035 nonsense_mediated_decay
ENST00000514479 (PPARGC1A-013) 23828490-23829671 retained_intron
ENST00000514494 (PPARGC1A-002) 23884499-23904089 retained_intron
ENST00000514517 (PPARGC1A-010) 23881088-23882103 processed_transcript
ENST00000515534 (PPARGC1A-015) 23866120-23890029 processed_transcript
ENST00000612355 (PPARGC1A-201) 23824372-23890077 protein_coding
ENST00000613098 (PPARGC1A-202) 23795339-23881292 protein_coding
ENST00000617484 (PPARGC1A-203) 23820610-23890077 protein_coding
ENSG00000152990 (GPR125)
G protein-coupled receptor 125 		ENST00000282943 (GPR125-005) 22387708-22455834 processed_transcript
ENST00000334304 (GPR125-001) 22387375-22516054 protein_coding
ENST00000499527 (GPR125-012) 22387400-22394868 retained_intron
ENST00000502482 (GPR125-014) 22420038-22515997 protein_coding
ENST00000504617 (GPR125-023) 22392545-22413315 processed_transcript
ENST00000506133 (GPR125-020) 22442650-22473806 processed_transcript
ENST00000506155 (GPR125-022) 22413206-22414086 processed_transcript
ENST00000506346 (GPR125-017) 22473020-22515696 processed_transcript
ENST00000508133 (GPR125-010) 22414194-22443135 protein_coding
ENST00000511051 (GPR125-015) 22345071-22401504 nonsense_mediated_decay
ENST00000513385 (GPR125-018) 22445000-22514580 processed_transcript
ENST00000514129 (GPR125-021) 22438258-22473818 protein_coding
ENST00000514749 (GPR125-019) 22447440-22478236 processed_transcript
ENSG00000237350 (CDC42P6)
cell division cycle 42 pseudogene 6 		ENST00000421246 (CDC42P6-001) 22727375-22727950 processed_pseudogene
ENSG00000244538 (RP11-10G12.1)
 ENST00000480875 (RP11-10G12.1-001) 22594196-22594450 processed_pseudogene
ENSG00000248837 (RP11-412P11.1)
 ENST00000503017 (RP11-412P11.1-002) 22999586-23041015 lincRNA
ENST00000506425 (RP11-412P11.1-003) 23003153-23041518 lincRNA
ENST00000511453 (RP11-412P11.1-001) 22997551-23056862 lincRNA
ENSG00000249453 (RP13-497K6.1)
 ENST00000506514 (RP13-497K6.1-001) 23779590-23782560 antisense
ENSG00000249645 (RP11-552M14.1)
 ENST00000503394 (RP11-552M14.1-001) 23105502-23123487 lincRNA
ENSG00000249948 (GBA3)
glucosidase, beta, acid 3 (gene/pseudogene) 		ENST00000503442 (GBA3-003) 22692925-22819575 polymorphic_pseudogene
ENST00000504802 (GBA3-004) 22714092-22715496 processed_transcript
ENST00000508166 (GBA3-001) 22692914-22819575 polymorphic_pseudogene
ENST00000508264 (GBA3-005) 22754413-22819282 processed_transcript
ENST00000511446 (GBA3-002) 22714089-22819527 polymorphic_pseudogene
ENST00000610628 (GBA3-201) 22692914-22819570 protein_coding
ENST00000613293 (GBA3-202) 22692914-22819568 protein_coding
ENSG00000250137 (RP11-380P13.1)
 ENST00000499715 (RP11-380P13.1-002) 23762927-23768625 antisense
ENST00000514290 (RP11-380P13.1-001) 23560923-23768652 antisense
ENSG00000251220 (RFPL4AP3)
ret finger protein-like 4A pseudogene 3 		ENST00000515267 (RFPL4AP3-001) 23514940-23515284 processed_pseudogene
ENSG00000251292 (ERVH-1)
endogenous retrovirus group H, member 1 		ENST00000507666 (ERVH-1-001) 23723262-23733579 lincRNA
ENSG00000251516 (RP11-10G12.2)
 ENST00000504151 (RP11-10G12.2-001) 22607501-22611063 unprocessed_pseudogene
CIL_0002OU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029090-ENSMUSG00000029167 CGP 10090 5:49959951-51567725
GeneTranscriptPositionBiotype
ENSMUSG00000029090 (Gpr125)
G protein-coupled receptor 125 		ENSMUST00000030971 (Gpr125-201) 49959951-50058996 protein_coding
ENSMUSG00000029167 (Ppargc1a)
peroxisome proliferative activated receptor, gamma, coactivator 1 alpha 		ENSMUST00000031059 (Ppargc1a-002) 51457982-51553857 nonsense_mediated_decay
ENSMUST00000127135 (Ppargc1a-004) 51498141-51567724 protein_coding
ENSMUST00000132734 (Ppargc1a-001) 51454249-51553921 protein_coding
ENSMUST00000151104 (Ppargc1a-003) 51490200-51567725 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002OU_0001ENSG00000109819ENST00000264867ENST00000503714ENST00000505469ENST00000506055ENST00000507342ENST00000507380ENST00000508380ENST00000509642ENST00000509702ENST00000512169ENST00000513205ENST00000514479ENST00000514494ENST00000514517ENST00000515534ENST00000612355ENST00000613098ENST00000617484ENSG00000152990ENST00000282943ENST00000334304ENST00000499527ENST00000502482ENST00000504617ENST00000506133ENST00000506155ENST00000506346ENST00000508133ENST00000511051ENST00000513385ENST00000514129ENST00000514749ENSG00000237350ENST00000421246ENSG00000244538ENST00000480875ENSG00000248837ENST00000503017ENST00000506425ENST00000511453ENSG00000249453ENST00000506514ENSG00000249645ENST00000503394ENSG00000249948ENST00000503442ENST00000504802ENST00000508166ENST00000508264ENST00000511446ENST00000610628ENST00000613293ENSG00000250137ENST00000499715ENST00000514290ENSG00000251220ENST00000515267ENSG00000251292ENST00000507666ENSG00000251516ENST00000504151CIL_0002OU_0002ENSMUSG00000029090ENSMUST00000030971ENSMUSG00000029167ENSMUST00000031059ENSMUST00000127135ENSMUST00000132734ENSMUST00000151104
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002OU_0001ENSG00000109819ENST00000264867ENST00000506055ENST00000507380ENST00000514479ENST00000612355ENST00000613098ENSG00000152990ENST00000282943ENST00000334304ENST00000499527ENST00000502482ENSG00000237350ENST00000421246ENSG00000244538ENST00000480875ENSG00000248837ENST00000503017ENST00000511453ENSG00000249453ENST00000506514ENSG00000249645ENST00000503394ENSG00000249948ENST00000503442ENST00000508166ENST00000508264ENST00000511446ENST00000610628ENST00000613293ENSG00000250137ENST00000499715ENST00000514290ENSG00000251220ENST00000515267ENSG00000251292ENST00000507666ENSG00000251516ENST00000504151CIL_0002OU_0002ENSMUSG00000029090ENSMUST00000030971ENSMUSG00000029167ENSMUST00000031059ENSMUST00000127135ENSMUST00000132734ENSMUST00000151104
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109819 ENST00000264867 1.030±0.00 1.111±0.00 12.005±0.00 2.330±0.80 0.378±0.00 2.128±0.00 8.293±5.05 7.411±4.14 0.772±0.01 0.628±0.00 3.904±0.00 1.345±0.80 0.034±0.02 0.321±0.00
ENST00000503714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506055 N/A N/A N/A 1.656±0.00 0.691±0.00 5.016±0.00 1.959±0.00 N/A N/A 0.403±0.00 6.279±0.00 N/A 0.009±0.00 N/A
ENST00000507342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507380 N/A N/A N/A N/A 0.467±0.00 N/A 2.792±0.00 3.370±0.00 N/A N/A 7.220±0.00 N/A N/A N/A
ENST00000508380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.173±0.01 N/A
ENST00000514494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612355 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.291±0.00 N/A N/A N/A N/A
ENST00000613098 N/A N/A N/A N/A N/A N/A 2.027±0.00 5.572±0.00 0.482±0.00 N/A N/A N/A N/A N/A
ENST00000617484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000152990 ENST00000282943 N/A 0.778±0.00 1.759±0.00 3.056±0.00 N/A 3.219±0.00 1.492±0.00 5.221±0.00 2.581±1.61 N/A 3.126±0.00 4.319±0.00 9.980±0.00 4.950±0.00
ENST00000334304 0.976±0.00 0.732±0.00 0.378±0.00 7.552±0.00 2.447±0.00 1.732±0.33 1.709±1.21 3.219±0.00 8.437±0.00 1.210±0.00 3.313±0.00 2.084±1.19 1.834±1.40 4.069±0.00
ENST00000499527 N/A 0.402±0.00 0.428±0.00 N/A 0.678±0.00 1.125±0.00 N/A N/A N/A N/A N/A 1.117±0.24 N/A N/A
ENST00000502482 N/A N/A 0.679±0.00 N/A N/A N/A N/A N/A N/A 0.601±0.00 N/A 0.916±0.00 N/A N/A
ENST00000504617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000237350 ENST00000421246 N/A 0.088±0.00 N/A 0.044±0.00 0.185±0.00 N/A 0.020±0.00 0.284±0.22 0.407±0.00 N/A 0.057±0.00 0.206±0.05 0.074±0.02 N/A
ENSG00000244538 ENST00000480875 0.683±0.00 0.216±0.00 N/A 0.233±0.00 0.149±0.00 0.272±0.00 0.259±0.00 0.145±0.00 0.063±0.00 0.265±0.00 0.370±0.00 1.281±1.08 0.307±0.00 0.195±0.00
ENSG00000248837 ENST00000503017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.384±0.19
ENST00000506425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511453 0.016±0.00 0.065±0.00 N/A 0.044±0.00 0.013±0.00 0.038±0.00 0.028±0.00 0.035±0.00 0.012±0.00 0.040±0.00 N/A 0.007±0.00 N/A 0.072±0.00
ENSG00000249453 ENST00000506514 N/A N/A 1.312±0.00 0.085±0.00 N/A N/A 0.178±0.00 0.917±0.00 N/A 0.670±0.00 N/A 0.149±0.00 N/A N/A
ENSG00000249645 ENST00000503394 0.116±0.00 0.142±0.00 N/A 0.175±0.13 N/A N/A N/A 0.989±0.00 N/A N/A N/A N/A N/A 0.492±0.16
ENSG00000249948 ENST00000503442 N/A N/A N/A N/A N/A 2.460±0.00 N/A 5.268±1.04 0.019±0.00 N/A N/A N/A 0.011±0.00 N/A
ENST00000504802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508166 N/A N/A N/A N/A N/A N/A N/A 26.584±0.00 N/A N/A N/A N/A N/A 0.106±0.00
ENST00000508264 N/A 0.069±0.00 N/A N/A 0.014±0.00 N/A N/A N/A N/A 0.036±0.00 N/A N/A N/A 0.729±0.18
ENST00000511446 0.036±0.00 N/A 6.252±0.00 0.078±0.00 0.157±0.00 N/A N/A 2.725±0.00 N/A 0.048±0.00 0.020±0.00 0.149±0.08 N/A N/A
ENST00000610628 N/A 0.154±0.00 N/A N/A N/A N/A N/A 7.889±0.00 9.814±0.00 N/A N/A 0.101±0.00 N/A 0.233±0.13
ENST00000613293 N/A N/A 6.171±0.00 N/A N/A N/A N/A N/A 0.021±0.00 N/A N/A N/A 0.011±0.00 N/A
ENSG00000250137 ENST00000499715 0.046±0.00 0.253±0.00 N/A 0.266±0.00 N/A 0.140±0.00 0.065±0.00 1.687±0.00 0.081±0.00 N/A 0.146±0.04 0.175±0.17 N/A 0.021±0.00
ENST00000514290 N/A N/A N/A 0.153±0.00 0.482±0.00 0.130±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000251220 ENST00000515267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.664±0.00 N/A N/A N/A
ENSG00000251292 ENST00000507666 1.079±0.00 2.865±0.00 0.593±0.00 0.880±0.79 1.386±0.38 0.258±0.08 0.203±0.08 1.146±0.41 0.342±0.00 0.140±0.00 0.187±0.00 0.312±0.17 0.442±0.25 1.050±0.50
ENSG00000251516 ENST00000504151 N/A 0.091±0.00 N/A 0.049±0.00 0.046±0.00 0.043±0.00 N/A N/A N/A N/A N/A 0.225±0.00 N/A 0.097±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029090 ENSMUST00000030971 10.638±1.50 13.431±2.52 5.160±0.92 10.979±5.36 8.461±1.19 28.052±1.75 4.255±0.50 17.143±2.06 6.978±3.54 16.304±0.10 3.053±0.28 31.309±4.93 17.366±7.49 4.280±1.01
ENSMUSG00000029167 ENSMUST00000031059 0.415±0.06 0.329±0.13 0.229±0.00 N/A 0.912±0.65 2.414±0.57 5.412±0.26 4.325±1.33 0.310±0.08 0.223±0.05 1.433±0.00 0.323±0.04 0.286±0.00 0.190±0.03
ENSMUST00000127135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.090±0.00 N/A
ENSMUST00000132734 0.458±0.26 0.244±0.07 0.355±0.12 1.967±0.77 0.521±0.12 1.756±0.37 7.367±0.53 6.742±0.68 1.011±0.67 0.774±0.31 3.367±1.05 0.205±0.12 0.335±0.33 N/A
ENSMUST00000151104 0.691±0.15 0.513±0.26 N/A N/A 0.972±0.28 4.308±1.07 N/A N/A 0.969±0.06 0.592±0.13 N/A 1.137±0.50 N/A N/A

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