C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: islet cell autoantigen 1, 69kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000455539 ICA1-005 ENSG00000003147 9606 - 7:8113772-8262153 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000455539
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000455539 3.387±0.00 3.403±0.00 2.044±0.00 3.978±0.00 2.606±0.48 1.536±0.79 2.194±0.53 2.971±0.00 1.005±0.53 1.311±0.00 4.944±0.00 7.287±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EL CIL_0002EL_0001 CGP 7:7968794-8262687
CIL_0002VG CIL_0002VG_0001 CGP 7:8113184-8752963

Gene Ontology

GO IDEvidence TypeGO Description
GO:0019904 IEA protein domain specific binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038403 Ica1-001 protein_coding Mus_musculus 0 1327
ENSMUST00000115520 Ica1-004 protein_coding Mus_musculus 0 1327
ENSMUST00000115519 Ica1-006 protein_coding Mus_musculus 0 800
ENSMUST00000156695 Ica1-007 nonsense_mediated_decay Mus_musculus 0 793
ENSMUST00000153390 Ica1-005 protein_coding Mus_musculus 0 765
ENSMUST00000115518 Ica1-002 protein_coding Mus_musculus 0 730
ENSMUST00000126430 Ica1-010 protein_coding Mus_musculus 0 427
ENSMUST00000135113 Ica1-003 processed_transcript Mus_musculus 0 420
ENSMUST00000127398 Ica1-011 protein_coding Mus_musculus 6.99949e-42 176
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000006 64
ENSMUST00000125797 Atp13a2-003 retained_intron Mus_musculus 0.0000008 60

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