C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002WM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141570-ENSG00000141582 CGP 9606 17:79792132-79839429
GeneTranscriptPositionBiotype
ENSG00000141570 (CBX8)
chromobox homolog 8
ENST00000269385 (CBX8-001) 79792132-79797116 protein_coding
ENST00000413392 (CBX8-002) 79795049-79798331 protein_coding
ENST00000427800 (CBX8-004) 79795204-79801533 protein_coding
ENST00000485449 (CBX8-003) 79795394-79801683 processed_transcript
ENSG00000141582 (CBX4)
chromobox homolog 4
ENST00000269397 (CBX4-001) 79833156-79839429 protein_coding
ENST00000448310 (CBX4-002) 79835044-79839387 protein_coding
ENST00000494546 (CBX4-003) 79837746-79839413 retained_intron
ENST00000495122 (CBX4-004) 79835143-79837881 protein_coding
ENSG00000262768 (RP11-353N14.1)
ENST00000570512 (RP11-353N14.1-001) 79800598-79802529 antisense
ENSG00000262772 (RP11-353N14.2)
ENST00000576963 (RP11-353N14.2-001) 79823452-79827704 lincRNA
CIL_0002WM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025578-ENSMUSG00000039989 CGP 10090 11:119036305-119086221
GeneTranscriptPositionBiotype
ENSMUSG00000025578 (Cbx8)
chromobox 8
ENSMUST00000026663 (Cbx8-001) 119036305-119040969 protein_coding
ENSMUST00000128019 (Cbx8-002) 119039053-119040831 processed_transcript
ENSMUST00000143831 (Cbx8-003) 119039184-119040911 processed_transcript
ENSMUSG00000039989 (Cbx4)
chromobox 4
ENSMUST00000026665 (Cbx4-001) 119077573-119086221 protein_coding
ENSMUST00000145058 (Cbx4-002) 119081373-119086221 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002WM_0001ENSG00000141570ENST00000269385ENST00000413392ENST00000427800ENST00000485449ENSG00000141582ENST00000269397ENST00000448310ENST00000494546ENST00000495122ENSG00000262768ENST00000570512ENSG00000262772ENST00000576963CIL_0002WM_0002ENSMUSG00000025578ENSMUST00000026663ENSMUST00000128019ENSMUST00000143831ENSMUSG00000039989ENSMUST00000026665ENSMUST00000145058
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002WM_0001ENSG00000141570ENST00000269385ENST00000413392ENST00000427800ENSG00000141582ENST00000269397ENST00000448310ENST00000495122ENSG00000262768ENST00000570512ENSG00000262772ENST00000576963CIL_0002WM_0002ENSMUSG00000025578ENSMUST00000026663ENSMUST00000128019ENSMUST00000143831ENSMUSG00000039989ENSMUST00000026665ENSMUST00000145058
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141570 ENST00000269385 0.285±0.00 0.363±0.00 0.070±0.00 0.472±0.32 0.340±0.03 0.255±0.01 0.256±0.00 1.307±0.00 0.198±0.00 0.222±0.18 0.110±0.00 1.013±0.47 0.911±0.10 1.765±0.15
ENST00000413392 0.793±0.00 0.642±0.00 N/A N/A 1.198±0.00 1.101±0.00 N/A 4.397±0.00 0.770±0.00 N/A 0.515±0.00 1.419±0.64 1.935±1.07 4.132±2.66
ENST00000427800 N/A 0.484±0.00 N/A N/A 1.494±0.00 0.266±0.00 0.562±0.36 N/A N/A N/A 0.367±0.00 2.063±0.00 N/A N/A
ENST00000485449 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000141582 ENST00000269397 3.618±0.00 6.364±0.00 1.262±0.00 8.151±5.90 3.500±0.92 4.079±0.00 4.500±0.00 7.111±0.00 2.771±0.00 5.681±4.57 1.433±0.00 12.029±6.81 47.431±41.71 7.028±3.33
ENST00000448310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.865±0.00 N/A N/A N/A
ENST00000494546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495122 N/A N/A N/A N/A N/A N/A N/A N/A 1.819±0.00 3.207±0.00 N/A N/A N/A N/A
ENSG00000262768 ENST00000570512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.448±0.42 N/A 0.100±0.04
ENSG00000262772 ENST00000576963 0.026±0.00 0.027±0.00 N/A 0.097±0.02 0.084±0.01 N/A 0.117±0.00 0.101±0.00 0.024±0.00 0.156±0.00 N/A 0.122±0.05 0.050±0.00 0.465±0.19
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025578 ENSMUST00000026663 0.583±0.24 1.080±0.31 1.212±0.10 1.123±0.61 0.845±0.65 0.592±0.13 0.387±0.08 0.526±0.15 0.469±0.13 0.693±0.20 0.387±0.10 1.247±0.58 2.454±1.12 0.277±0.04
ENSMUST00000128019 N/A N/A N/A N/A N/A 0.465±0.00 N/A N/A 0.477±0.02 N/A 0.540±0.13 N/A 2.447±0.00 N/A
ENSMUST00000143831 1.738±0.47 4.108±1.27 1.725±0.00 2.348±0.00 2.052±0.67 1.259±0.28 0.577±0.07 0.861±0.20 1.078±0.62 1.114±0.42 0.860±0.31 2.821±0.31 10.164±1.60 0.298±0.02
ENSMUSG00000039989 ENSMUST00000026665 6.780±0.51 61.620±4.20 5.699±2.44 4.185±1.17 17.037±7.77 4.547±0.71 1.868±0.65 3.703±1.33 2.085±1.49 8.793±1.23 0.419±0.08 10.711±4.36 5.503±1.57 0.701±0.28
ENSMUST00000145058 N/A N/A 6.478±0.00 74.425±0.00 N/A N/A 1.276±0.00 N/A N/A N/A 0.303±0.08 27.568±37.98 49.755±68.54 5.365±4.51

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